The 2.0 version of rSNPBase

Variant report

Variant rs61770437
Chromosome Location chr1:85248462-85248463
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:23 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85241000-85263600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:85246000-85250600 Weak transcription Colon Smooth Muscle Colon
3 chr1:85246200-85250200 Weak transcription Stomach Smooth Muscle stomach
4 chr1:85246400-85250800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr1:85246400-85250800 Weak transcription NHEK skin
6 chr1:85246600-85250400 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr1:85246600-85250600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr1:85246600-85250600 Weak transcription HMEC breast
9 chr1:85247200-85248800 Enhancers Primary hematopoietic stem cells short term culture blood
10 chr1:85247800-85248600 Active TSS ES-I3 Cell Line embryonic stem cell
11 chr1:85248000-85248600 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
12 chr1:85248000-85248600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr1:85248000-85251200 Weak transcription Fetal Heart heart
14 chr1:85248200-85250600 Weak transcription Brain Cingulate Gyrus brain
15 chr1:85248400-85248600 Enhancers HUES48 Cell Line embryonic stem cell
16 chr1:85248400-85248600 Enhancers iPS-15b Cell Line embryonic stem cell
17 chr1:85248400-85248600 Enhancers Primary T cells from cord blood blood
18 chr1:85248400-85248600 Enhancers Primary T cells fromperipheralblood blood
19 chr1:85248400-85248600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
20 chr1:85248400-85248600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
21 chr1:85248400-85248600 Enhancers NHDF-Ad bronchial
22 chr1:85248400-85250800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr1:85248400-85250800 Weak transcription Brain Hippocampus Middle brain

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Last update: Aug 31, 2015