The 2.0 version of rSNPBase

Variant report

Variant rs61770436
Chromosome Location chr1:85247839-85247840
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85241000-85263600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:85246000-85250600 Weak transcription Colon Smooth Muscle Colon
3 chr1:85246200-85248000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr1:85246200-85248000 Weak transcription Primary T helper cells fromperipheralblood blood
5 chr1:85246200-85248200 Weak transcription NHDF-Ad bronchial
6 chr1:85246200-85250200 Weak transcription Stomach Smooth Muscle stomach
7 chr1:85246400-85248000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr1:85246400-85250800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr1:85246400-85250800 Weak transcription NHEK skin
10 chr1:85246600-85248000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr1:85246600-85250400 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr1:85246600-85250600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr1:85246600-85250600 Weak transcription HMEC breast
14 chr1:85246800-85248000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr1:85247200-85248800 Enhancers Primary hematopoietic stem cells short term culture blood
16 chr1:85247400-85248200 Enhancers Primary T killer memory cells from peripheral blood blood
17 chr1:85247600-85248000 Enhancers H1 Cell Line embryonic stem cell
18 chr1:85247600-85248000 Enhancers Primary T cells fromperipheralblood blood
19 chr1:85247600-85248000 Enhancers Primary T killer naive cells fromperipheralblood blood
20 chr1:85247600-85248200 Enhancers Fetal Thymus thymus
21 chr1:85247600-85248400 Active TSS Brain Anterior Caudate brain
22 chr1:85247800-85248000 Flanking Active TSS HUES6 Cell Line embryonic stem cell
23 chr1:85247800-85248000 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
24 chr1:85247800-85248000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
25 chr1:85247800-85248000 Active TSS Brain Germinal Matrix brain
26 chr1:85247800-85248000 Flanking Active TSS Brain Hippocampus Middle brain
27 chr1:85247800-85248000 Enhancers Fetal Heart heart
28 chr1:85247800-85248000 Bivalent Enhancer Osteobl bone
29 chr1:85247800-85248200 Flanking Active TSS HUES64 Cell Line embryonic stem cell
30 chr1:85247800-85248200 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
31 chr1:85247800-85248200 Enhancers iPS-20b Cell Line embryonic stem cell
32 chr1:85247800-85248200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
33 chr1:85247800-85248200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
34 chr1:85247800-85248200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr1:85247800-85248200 Active TSS Brain Angular Gyrus brain
36 chr1:85247800-85248200 Active TSS Brain Cingulate Gyrus brain
37 chr1:85247800-85248200 Enhancers Fetal Intestine Large intestine
38 chr1:85247800-85248400 Active TSS ES-WA7 Cell Line embryonic stem cell
39 chr1:85247800-85248400 Flanking Active TSS HUES48 Cell Line embryonic stem cell
40 chr1:85247800-85248400 Active TSS iPS-15b Cell Line embryonic stem cell
41 chr1:85247800-85248400 Flanking Active TSS Primary T cells from cord blood blood
42 chr1:85247800-85248400 Flanking Active TSS Cortex derived primary cultured neurospheres brain
43 chr1:85247800-85248400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
44 chr1:85247800-85248400 Active TSS Brain Inferior Temporal Lobe brain
45 chr1:85247800-85248400 Active TSS A549 lung
46 chr1:85247800-85248400 Active TSS K562 blood
47 chr1:85247800-85248600 Active TSS ES-I3 Cell Line embryonic stem cell

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Last update: Aug 31, 2015