Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10888943	0.96[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10888945	0.82[EUR][1000 genomes]
rs10888946	0.94[EUR][1000 genomes]
rs11206685	0.93[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11206687	0.93[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs11206688	0.87[AMR][1000 genomes]
rs12062107	0.81[EUR][1000 genomes]
rs12081053	0.89[GIH][hapmap];0.86[MEX][hapmap];0.86[TSI][hapmap]
rs4471303	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4926699	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4926700	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4926701	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4927277	0.83[AMR][1000 genomes]
rs6665427	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6666177	0.98[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6666586	0.98[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6666606	0.93[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6681658	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6684261	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72904468	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1818340	chr1:56359741-56408597	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56359400-56361600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr1:56360000-56364000	Weak transcription	A549	lung
3	chr1:56360400-56363600	Weak transcription	NHDF-Ad	bronchial
4	chr1:56360600-56363600	Weak transcription	Muscle Satellite Cultured Cells	--
5	chr1:56360800-56363600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr1:56360800-56363600	Weak transcription	Osteobl	bone
7	chr1:56361000-56361600	Enhancers	Fetal Intestine Small	intestine

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