Variant report
Variant | rs72904468 |
---|---|
Chromosome Location | chr1:56366209-56366210 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10789010 | 0.86[AMR][1000 genomes] |
rs10888945 | 0.96[AFR][1000 genomes];0.97[EUR][1000 genomes] |
rs10888946 | 0.84[EUR][1000 genomes] |
rs11206686 | 0.86[EUR][1000 genomes] |
rs11583130 | 0.86[EUR][1000 genomes] |
rs11804906 | 0.86[EUR][1000 genomes] |
rs12062107 | 0.96[AFR][1000 genomes];0.96[EUR][1000 genomes] |
rs12119683 | 0.85[AMR][1000 genomes];0.85[EUR][1000 genomes] |
rs12119831 | 0.86[EUR][1000 genomes] |
rs12744110 | 0.85[AMR][1000 genomes];0.85[EUR][1000 genomes] |
rs4130692 | 0.83[AMR][1000 genomes] |
rs4468206 | 0.85[AMR][1000 genomes];0.84[EUR][1000 genomes] |
rs4471303 | 0.82[EUR][1000 genomes] |
rs4573554 | 0.85[AMR][1000 genomes];0.84[EUR][1000 genomes] |
rs4926703 | 0.81[EUR][1000 genomes] |
rs4927274 | 0.85[AMR][1000 genomes];0.85[EUR][1000 genomes] |
rs4927275 | 0.85[AMR][1000 genomes];0.84[EUR][1000 genomes] |
rs4927276 | 0.85[AMR][1000 genomes];0.84[EUR][1000 genomes] |
rs4989276 | 0.82[ASN][1000 genomes] |
rs56686347 | 0.84[EUR][1000 genomes] |
rs61774842 | 0.86[AMR][1000 genomes] |
rs6588581 | 0.86[EUR][1000 genomes] |
rs6588591 | 0.80[EUR][1000 genomes] |
rs6660000 | 0.86[EUR][1000 genomes] |
rs6665427 | 0.82[EUR][1000 genomes] |
rs6670350 | 0.86[EUR][1000 genomes] |
rs6681658 | 0.82[EUR][1000 genomes] |
rs6684261 | 0.82[EUR][1000 genomes] |
rs6684334 | 0.86[AMR][1000 genomes] |
rs6684428 | 0.86[AMR][1000 genomes] |
rs6684599 | 0.86[EUR][1000 genomes] |
rs6695436 | 0.86[EUR][1000 genomes] |
rs7538008 | 0.86[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv1818340 | chr1:56359741-56408597 | Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:56365200-56382200 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |