Variant report

Variant	rs4933744
Chromosome Location	chr10:94573550-94573551
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10748583	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs10748584	0.87[GIH][hapmap];0.87[TSI][hapmap]
rs10786060	0.87[GIH][hapmap]
rs10882115	0.89[EUR][1000 genomes]
rs10882117	0.87[GIH][hapmap];0.87[TSI][hapmap]
rs10882120	0.89[CEU][hapmap]
rs10882123	0.87[GIH][hapmap];0.87[TSI][hapmap]
rs10882125	0.87[GIH][hapmap]
rs10882129	0.87[GIH][hapmap]
rs1571034	0.82[GIH][hapmap]
rs17107949	0.82[LWK][hapmap]
rs1987017	0.82[GIH][hapmap];0.87[TSI][hapmap]
rs2490739	0.89[GIH][hapmap];0.87[TSI][hapmap]
rs2490741	0.91[GIH][hapmap];0.87[TSI][hapmap]
rs3740379	0.88[LWK][hapmap]
rs4933240	0.83[EUR][1000 genomes]
rs4933753	0.87[GIH][hapmap]
rs7068232	0.87[GIH][hapmap];0.87[TSI][hapmap]
rs7069896	0.82[YRI][hapmap]
rs9633694	0.87[GIH][hapmap];0.87[TSI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3412374	chr10:94573086-94573550	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:94571000-94574400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr10:94571200-94574600	Weak transcription	K562	blood
3	chr10:94572000-94575400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr10:94572200-94574000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr10:94572200-94574200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr10:94572200-94574800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr10:94572400-94573800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr10:94572400-94574000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr10:94572600-94573800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr10:94572600-94573800	Weak transcription	HUVEC	blood vessel

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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