Variant report

Variant	rs10882115
Chromosome Location	chr10:94583748-94583749
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:94571094..94575993-chr10:94578849..94584538,5	K562	blood:

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10748583	0.97[EUR][1000 genomes]
rs10748584	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10786056	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10786059	0.95[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap]
rs10786060	0.94[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap]
rs10882117	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10882120	1.00[CEU][hapmap];0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10882121	1.00[CHB][hapmap];0.88[JPT][hapmap];0.87[ASN][1000 genomes]
rs10882122	0.87[ASN][1000 genomes]
rs10882123	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10882125	0.94[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap]
rs10882129	0.94[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap]
rs11516919	1.00[CHB][hapmap];0.88[JPT][hapmap];0.87[ASN][1000 genomes]
rs12769058	0.84[ASN][1000 genomes]
rs1571034	0.83[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap]
rs1967817	0.84[ASN][1000 genomes]
rs1987017	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2246696	0.87[ASN][1000 genomes]
rs2490736	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2490739	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2490741	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4284324	0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4508117	1.00[CHB][hapmap];0.83[ASN][1000 genomes]
rs4933744	0.89[EUR][1000 genomes]
rs4933748	0.87[ASN][1000 genomes]
rs4933753	0.94[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap]
rs7068232	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7087174	1.00[CHB][hapmap];0.88[JPT][hapmap];0.89[ASN][1000 genomes]
rs7095772	1.00[CHB][hapmap];0.88[JPT][hapmap]
rs7097943	0.83[ASN][1000 genomes]
rs7908179	0.89[ASN][1000 genomes]
rs7910006	1.00[CHB][hapmap];0.88[JPT][hapmap];0.87[ASN][1000 genomes]
rs7913949	0.89[ASN][1000 genomes]
rs7914571	1.00[CHB][hapmap];0.88[JPT][hapmap]
rs7915463	0.93[CHB][hapmap];0.88[JPT][hapmap]
rs835238	1.00[CHB][hapmap]
rs9633694	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:94581600-94592800	Weak transcription	Lung	lung
2	chr10:94582400-94585200	Weak transcription	A549	lung
3	chr10:94582400-94586200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr10:94582600-94585400	Weak transcription	Right Atrium	heart
5	chr10:94582600-94585400	Weak transcription	HepG2	liver
6	chr10:94582600-94590400	Weak transcription	Primary neutrophils fromperipheralblood	blood
7	chr10:94582800-94585200	Weak transcription	Stomach Mucosa	stomach
8	chr10:94582800-94586000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr10:94582800-94586000	Weak transcription	Skeletal Muscle Male	skeletal muscle
10	chr10:94582800-94586600	Weak transcription	Muscle Satellite Cultured Cells	--
11	chr10:94582800-94586600	Weak transcription	Left Ventricle	heart
12	chr10:94582800-94589000	Weak transcription	Fetal Muscle Leg	muscle
13	chr10:94582800-94589200	Weak transcription	Spleen	Spleen
14	chr10:94582800-94592800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr10:94583000-94584200	Enhancers	HUVEC	blood vessel
16	chr10:94583000-94585400	Weak transcription	Primary monocytes fromperipheralblood	blood
17	chr10:94583000-94585400	Weak transcription	Primary B cells from peripheral blood	blood
18	chr10:94583000-94585400	Weak transcription	Monocytes-CD14+_RO01746	blood
19	chr10:94583000-94586000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
20	chr10:94583000-94586000	Weak transcription	NHEK	skin
21	chr10:94583000-94590400	Weak transcription	Primary hematopoietic stem cells	blood
22	chr10:94583200-94585800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
23	chr10:94583400-94583800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr10:94583600-94584000	ZNF genes & repeats	K562	blood
25	chr10:94583600-94584200	Enhancers	Primary hematopoietic stem cells short term culture	blood

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