Variant report

Variant	rs7913949
Chromosome Location	chr10:94605061-94605062
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:94448193..94452899-chr10:94604769..94609293,6	K562	blood:
2	chr10:94601204..94605771-chr10:94608144..94610303,4	MCF-7	breast:
3	chr10:94449811..94452513-chr10:94604477..94606269,2	K562	blood:
4	chr10:94604476..94607331-chr10:94608009..94611387,4	K562	blood:

Variant related genes	Relation type
ENSG00000152804	Chromatin interaction
ENSG00000138190	Chromatin interaction

Extended variants
information (count: 52 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:52)

rs_ID	r²[population]
rs10748584	0.97[ASN][1000 genomes]
rs10786056	0.92[ASN][1000 genomes]
rs10882115	0.89[ASN][1000 genomes]
rs10882117	0.98[ASN][1000 genomes]
rs10882118	0.97[EUR][1000 genomes]
rs10882120	0.96[ASN][1000 genomes]
rs10882121	0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10882122	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10882123	0.92[ASN][1000 genomes]
rs11187186	0.88[EUR][1000 genomes]
rs11187192	0.95[EUR][1000 genomes]
rs11187193	0.95[EUR][1000 genomes]
rs11187197	0.95[EUR][1000 genomes]
rs11516919	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12769058	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1967817	0.92[ASN][1000 genomes]
rs1987017	0.96[ASN][1000 genomes]
rs2246696	0.94[ASN][1000 genomes]
rs2422060	0.97[EUR][1000 genomes]
rs2490736	0.97[ASN][1000 genomes]
rs2490739	0.97[ASN][1000 genomes]
rs2490741	0.98[ASN][1000 genomes]
rs2901633	0.97[EUR][1000 genomes]
rs2901634	0.96[EUR][1000 genomes]
rs3740380	0.97[EUR][1000 genomes]
rs4284324	0.98[ASN][1000 genomes]
rs4417182	0.96[EUR][1000 genomes]
rs4508117	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4933244	0.81[EUR][1000 genomes]
rs4933748	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4933750	0.81[EUR][1000 genomes]
rs55944050	0.94[EUR][1000 genomes]
rs6583845	0.81[EUR][1000 genomes]
rs7068012	0.82[EUR][1000 genomes]
rs7068232	0.92[ASN][1000 genomes]
rs7078801	0.82[EUR][1000 genomes]
rs7081789	0.81[EUR][1000 genomes]
rs7087174	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7095772	0.83[EUR][1000 genomes]
rs7097943	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7904552	0.95[EUR][1000 genomes]
rs7906224	0.95[EUR][1000 genomes]
rs7907142	0.88[EUR][1000 genomes]
rs7908179	0.93[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7910006	0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7911519	0.83[EUR][1000 genomes]
rs7915463	0.83[EUR][1000 genomes]
rs7916038	0.94[EUR][1000 genomes]
rs7919095	0.82[EUR][1000 genomes]
rs7919589	0.83[EUR][1000 genomes]
rs7923502	0.81[EUR][1000 genomes]
rs9633694	0.92[ASN][1000 genomes]

No data

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:94592200-94605600	Weak transcription	Primary B cells from peripheral blood	blood
2	chr10:94596800-94607800	Weak transcription	HSMMtube	muscle
3	chr10:94598600-94607200	Weak transcription	Primary T cells from cord blood	blood
4	chr10:94599400-94607200	Weak transcription	Osteobl	bone
5	chr10:94599400-94607400	Weak transcription	Spleen	Spleen
6	chr10:94599600-94606600	Weak transcription	Lung	lung
7	chr10:94599600-94607600	Weak transcription	Fetal Muscle Trunk	muscle
8	chr10:94600600-94607800	Weak transcription	Sigmoid Colon	Sigmoid Colon
9	chr10:94602600-94605600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr10:94602600-94607600	Enhancers	Primary hematopoietic stem cells short term culture	blood
11	chr10:94602800-94605600	Enhancers	Primary hematopoietic stem cells	blood
12	chr10:94602800-94605600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr10:94602800-94607400	Enhancers	Primary monocytes fromperipheralblood	blood
14	chr10:94603000-94605400	Enhancers	Primary B cells from cord blood	blood
15	chr10:94603000-94607000	Weak transcription	Fetal Intestine Large	intestine
16	chr10:94603000-94607000	Weak transcription	Skeletal Muscle Female	skeletal muscle
17	chr10:94603200-94605200	Weak transcription	K562	blood
18	chr10:94603200-94605800	Weak transcription	HepG2	liver
19	chr10:94603200-94606400	Weak transcription	Hela-S3	cervix
20	chr10:94603200-94607200	Weak transcription	Liver	Liver
21	chr10:94603200-94607400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
22	chr10:94603200-94607400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
23	chr10:94603400-94607200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
24	chr10:94603400-94607200	Weak transcription	A549	lung
25	chr10:94603400-94607400	Weak transcription	Adipose Nuclei	Adipose
26	chr10:94603800-94605400	Enhancers	Monocytes-CD14+_RO01746	blood
27	chr10:94604000-94605800	Enhancers	Duodenum Mucosa	Duodenum
28	chr10:94604000-94606800	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
29	chr10:94604200-94607200	Weak transcription	Placenta	Placenta
30	chr10:94604200-94607400	Weak transcription	Fetal Muscle Leg	muscle
31	chr10:94604200-94607400	Weak transcription	Skeletal Muscle Male	skeletal muscle
32	chr10:94604200-94607600	Weak transcription	Brain Hippocampus Middle	brain
33	chr10:94604400-94605800	Strong transcription	HUVEC	blood vessel

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