Variant report

Variant rs4957551
Chromosome Location chr5:107596575-107596576
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:107575400-107617600 Weak transcription Primary B cells from cord blood blood
2 chr5:107577000-107616000 Weak transcription Primary T cells from cord blood blood
3 chr5:107585000-107617800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr5:107593600-107596600 Enhancers Fetal Heart heart
5 chr5:107593600-107614000 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr5:107594200-107596800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
7 chr5:107595000-107596800 Enhancers NH-A brain
8 chr5:107595400-107596800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
9 chr5:107595800-107596600 Enhancers NHLF lung
10 chr5:107595800-107596800 Enhancers Breast Myoepithelial Primary Cells Breast
11 chr5:107595800-107596800 Enhancers Rectal Mucosa Donor 29 rectum
12 chr5:107596000-107596600 Enhancers Primary neutrophils fromperipheralblood blood
13 chr5:107596000-107596600 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr5:107596000-107596600 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr5:107596000-107596600 Enhancers Fetal Kidney kidney
16 chr5:107596000-107596600 Active TSS Pancreatic Islets Pancreatic Islet
17 chr5:107596000-107596600 Flanking Active TSS HUVEC blood vessel
18 chr5:107596000-107596600 Active TSS Monocytes-CD14+_RO01746 blood
19 chr5:107596000-107596800 Enhancers Liver Liver
20 chr5:107596200-107596600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
21 chr5:107596200-107596600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
22 chr5:107596200-107596600 Active TSS Primary hematopoietic stem cells blood
23 chr5:107596200-107596600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
24 chr5:107596200-107596600 Enhancers Primary T helper 17 cells PMA-I stimulated --
25 chr5:107596200-107596600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
26 chr5:107596200-107596600 Active TSS Brain Anterior Caudate brain
27 chr5:107596200-107596600 Active TSS Fetal Lung lung
28 chr5:107596200-107596600 Enhancers Gastric stomach
29 chr5:107596200-107596600 Enhancers Ovary ovary
30 chr5:107596200-107596600 Flanking Active TSS K562 blood
31 chr5:107596200-107596800 Active TSS Adipose Nuclei Adipose
32 chr5:107596400-107596600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr5:107596400-107596600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr5:107596400-107596600 Enhancers Muscle Satellite Cultured Cells --
35 chr5:107596400-107596600 Active TSS Rectal Mucosa Donor 31 rectum
36 chr5:107596400-107596600 Active TSS Osteobl bone
37 chr5:107596400-107596800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr5:107596400-107596800 Enhancers Skeletal Muscle Male skeletal muscle
39 chr5:107596400-107596800 Active TSS GM12878-XiMat blood
40 chr5:107596400-107601400 Weak transcription Brain Inferior Temporal Lobe brain
41 chr5:107596400-107602000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

Quick Search:


  
Input of quick search could be:

what's new

Quick links