The 2.0 version of rSNPBase

Variant report

Variant rs4985746
Chromosome Location chr17:17098213-17098214
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:17076600-17104600 Weak transcription K562 blood
2 chr17:17086400-17104800 Weak transcription Brain Substantia Nigra brain
3 chr17:17086400-17106600 Weak transcription Colonic Mucosa Colon
4 chr17:17090200-17107000 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr17:17090200-17107400 Weak transcription Small Intestine intestine
6 chr17:17090800-17106600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
7 chr17:17090800-17106600 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr17:17090800-17107200 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr17:17091200-17104400 Weak transcription Primary T helper naive cells fromperipheralblood blood
10 chr17:17091400-17104000 Weak transcription Primary neutrophils fromperipheralblood blood
11 chr17:17091800-17107600 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr17:17092200-17105400 Weak transcription Gastric stomach
13 chr17:17092400-17104200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr17:17092400-17105600 Weak transcription Brain Germinal Matrix brain
15 chr17:17093000-17104800 Weak transcription Hela-S3 cervix
16 chr17:17093600-17102400 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr17:17093600-17103400 Weak transcription Fetal Thymus thymus
18 chr17:17093600-17104400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr17:17093600-17107400 Weak transcription Dnd41 blood
20 chr17:17093600-17108400 Weak transcription Thymus Thymus
21 chr17:17093800-17103400 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr17:17093800-17104000 Weak transcription Fetal Intestine Small intestine
23 chr17:17093800-17104200 Weak transcription Primary T cells fromperipheralblood blood
24 chr17:17093800-17105400 Weak transcription Pancreas Pancrea
25 chr17:17093800-17105600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
26 chr17:17093800-17105600 Weak transcription Esophagus oesophagus
27 chr17:17093800-17107400 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr17:17093800-17107600 Weak transcription Monocytes-CD14+_RO01746 blood
29 chr17:17094000-17103400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr17:17094000-17104600 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr17:17094000-17107200 Weak transcription Aorta Aorta
32 chr17:17094200-17100600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr17:17094200-17100600 Weak transcription Fetal Lung lung
34 chr17:17094200-17104800 Weak transcription HepG2 liver
35 chr17:17094400-17103200 Weak transcription Primary T cells from cord blood blood
36 chr17:17094800-17100200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr17:17095000-17100400 Weak transcription NHEK skin
38 chr17:17095000-17104600 Weak transcription Primary hematopoietic stem cells blood
39 chr17:17095000-17104800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr17:17095000-17104800 Weak transcription Right Ventricle heart
41 chr17:17095000-17105600 Weak transcription Right Atrium heart
42 chr17:17095200-17099800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr17:17095200-17104600 Weak transcription Lung lung
44 chr17:17095200-17104600 Weak transcription Spleen Spleen
45 chr17:17095200-17105800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr17:17095200-17108400 Weak transcription Placenta Amnion Placenta Amnion
47 chr17:17095400-17098600 Enhancers GM12878-XiMat blood
48 chr17:17095400-17102800 Weak transcription Rectal Smooth Muscle rectum
49 chr17:17095400-17104600 Weak transcription Fetal Brain Female brain
50 chr17:17095400-17108200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015