Variant report

Variant rs8079563
Chromosome Location chr17:16932880-16932881
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:16928600-16933800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
2 chr17:16928800-16934000 Enhancers Fetal Intestine Large intestine
3 chr17:16930200-16936200 Enhancers Fetal Muscle Leg muscle
4 chr17:16930400-16934000 Enhancers Fetal Intestine Small intestine
5 chr17:16930400-16934000 Enhancers Stomach Mucosa stomach
6 chr17:16930400-16934400 Enhancers Placenta Placenta
7 chr17:16930400-16936600 Enhancers Fetal Muscle Trunk muscle
8 chr17:16930600-16933000 Enhancers Gastric stomach
9 chr17:16930600-16933200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr17:16930600-16933600 Enhancers Placenta Amnion Placenta Amnion
11 chr17:16930600-16934400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr17:16930600-16936000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr17:16930600-16936200 Enhancers HMEC breast
14 chr17:16930600-16937600 Enhancers HSMMtube muscle
15 chr17:16930800-16933000 Enhancers Lung lung
16 chr17:16930800-16933200 Enhancers Rectal Mucosa Donor 31 rectum
17 chr17:16930800-16933200 Enhancers Sigmoid Colon Sigmoid Colon
18 chr17:16930800-16933400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr17:16930800-16933600 Flanking Active TSS HepG2 liver
20 chr17:16930800-16933800 Enhancers ES-I3 Cell Line embryonic stem cell
21 chr17:16930800-16935800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
22 chr17:16930800-16936000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr17:16931000-16933000 Flanking Active TSS A549 lung
24 chr17:16931000-16934000 Enhancers HUES6 Cell Line embryonic stem cell
25 chr17:16931000-16934200 Enhancers iPS-18 Cell Line embryonic stem cell
26 chr17:16931000-16936000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr17:16931200-16933800 Enhancers HUES64 Cell Line embryonic stem cell
28 chr17:16931400-16933000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr17:16931400-16933200 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
30 chr17:16931400-16933400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr17:16931400-16933600 Enhancers H1 Cell Line embryonic stem cell
32 chr17:16931400-16933600 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
33 chr17:16931400-16933800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr17:16931400-16933800 Enhancers Primary B cells from peripheral blood blood
35 chr17:16931400-16934400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
36 chr17:16931400-16936000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr17:16931600-16933000 Enhancers H9 Cell Line embryonic stem cell
38 chr17:16931600-16933000 Enhancers Rectal Mucosa Donor 29 rectum
39 chr17:16931600-16933200 Enhancers Fetal Kidney kidney
40 chr17:16931600-16933600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
41 chr17:16931600-16933600 Flanking Active TSS Hela-S3 cervix
42 chr17:16931600-16933800 Enhancers Primary B cells from cord blood blood
43 chr17:16931600-16934200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr17:16931600-16936400 Enhancers Fetal Lung lung
45 chr17:16931800-16933200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
46 chr17:16931800-16933200 Enhancers Osteobl bone
47 chr17:16931800-16933400 Weak transcription Brain Cingulate Gyrus brain
48 chr17:16931800-16933600 Enhancers K562 blood
49 chr17:16932000-16933000 Weak transcription ES-WA7 Cell Line embryonic stem cell
50 chr17:16932000-16933000 Enhancers Esophagus oesophagus

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