The 2.0 version of rSNPBase

Variant report

Variant rs56249423
Chromosome Location chr6:143519418-143519419
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:143458800-143529200 Weak transcription Primary T cells from cord blood blood
2 chr6:143479600-143534600 Weak transcription Gastric stomach
3 chr6:143484400-143519800 Weak transcription Primary neutrophils fromperipheralblood blood
4 chr6:143497800-143522800 Weak transcription Fetal Muscle Trunk muscle
5 chr6:143498000-143526000 Weak transcription Duodenum Mucosa Duodenum
6 chr6:143499200-143525400 Weak transcription Esophagus oesophagus
7 chr6:143499200-143534600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr6:143499400-143520800 Weak transcription Lung lung
9 chr6:143501400-143534800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr6:143504800-143521800 Weak transcription Brain Substantia Nigra brain
11 chr6:143505600-143534600 Weak transcription H9 Cell Line embryonic stem cell
12 chr6:143509600-143523200 Weak transcription Adipose Nuclei Adipose
13 chr6:143509600-143524400 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr6:143509800-143519800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr6:143509800-143523800 Weak transcription Aorta Aorta
16 chr6:143513800-143520600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr6:143514200-143545400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr6:143514400-143545200 Weak transcription HMEC breast
19 chr6:143515000-143521000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr6:143515800-143520200 Genic enhancers K562 blood
21 chr6:143516000-143545600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr6:143516400-143525600 Weak transcription Liver Liver
23 chr6:143516800-143525400 Weak transcription Fetal Intestine Small intestine
24 chr6:143517000-143519600 Weak transcription Left Ventricle heart
25 chr6:143517200-143523800 Weak transcription Ovary ovary
26 chr6:143517200-143523800 Weak transcription Right Atrium heart
27 chr6:143517200-143528200 Weak transcription Psoas Muscle Psoas
28 chr6:143517400-143525800 Weak transcription Fetal Stomach stomach
29 chr6:143517800-143525200 Weak transcription Brain Cingulate Gyrus brain
30 chr6:143518000-143524800 Weak transcription HepG2 liver
31 chr6:143518200-143525200 Weak transcription Fetal Intestine Large intestine
32 chr6:143518400-143519800 Weak transcription HUVEC blood vessel
33 chr6:143518400-143525000 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr6:143518600-143520000 Enhancers Fetal Muscle Leg muscle
35 chr6:143518800-143520000 Enhancers NHDF-Ad bronchial
36 chr6:143519000-143525200 Weak transcription HSMM muscle
37 chr6:143519400-143519800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr6:143519400-143520200 Enhancers Primary hematopoietic stem cells short term culture blood
39 chr6:143519400-143520200 Enhancers Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015