The 2.0 version of rSNPBase

Variant report

Variant rs73777895
Chromosome Location chr6:143479317-143479318
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:143443800-143498800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr6:143444600-143516400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr6:143448400-143487400 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr6:143452000-143497000 Weak transcription Fetal Stomach stomach
5 chr6:143453000-143481600 Weak transcription Right Ventricle heart
6 chr6:143453000-143497200 Weak transcription Pancreas Pancrea
7 chr6:143453000-143508600 Weak transcription Fetal Lung lung
8 chr6:143453000-143510600 Weak transcription Brain Inferior Temporal Lobe brain
9 chr6:143458200-143486600 Weak transcription Aorta Aorta
10 chr6:143458800-143529200 Weak transcription Primary T cells from cord blood blood
11 chr6:143459200-143484200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr6:143459600-143484000 Weak transcription HUES64 Cell Line embryonic stem cell
13 chr6:143459600-143486600 Weak transcription Duodenum Mucosa Duodenum
14 chr6:143459600-143505400 Weak transcription HUES48 Cell Line embryonic stem cell
15 chr6:143461000-143487400 Weak transcription Brain Cingulate Gyrus brain
16 chr6:143462200-143497800 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr6:143463000-143508400 Weak transcription Stomach Smooth Muscle stomach
18 chr6:143465800-143483600 Weak transcription H9 Cell Line embryonic stem cell
19 chr6:143468400-143484600 Weak transcription Primary hematopoietic stem cells blood
20 chr6:143469800-143483600 Weak transcription Fetal Intestine Large intestine
21 chr6:143470200-143485800 Weak transcription HepG2 liver
22 chr6:143471800-143486600 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr6:143474600-143479800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr6:143476400-143482000 Enhancers Psoas Muscle Psoas
25 chr6:143477000-143482200 Enhancers Skeletal Muscle Male skeletal muscle
26 chr6:143477000-143501200 Weak transcription Right Atrium heart
27 chr6:143477800-143480200 Enhancers Liver Liver
28 chr6:143477800-143481600 Enhancers NHEK skin
29 chr6:143477800-143481800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
30 chr6:143477800-143481800 Enhancers HMEC breast
31 chr6:143477800-143482200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
32 chr6:143478000-143480400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr6:143478200-143483800 Weak transcription Fetal Intestine Small intestine
34 chr6:143478400-143482200 Enhancers Osteobl bone
35 chr6:143478600-143479800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr6:143478600-143480800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr6:143478800-143480000 Enhancers Muscle Satellite Cultured Cells --
38 chr6:143478800-143480800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr6:143478800-143482600 Enhancers NHDF-Ad bronchial
40 chr6:143479000-143479600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr6:143479000-143479600 Enhancers Ovary ovary
42 chr6:143479000-143479800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr6:143479000-143480000 Enhancers K562 blood
44 chr6:143479000-143480600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
45 chr6:143479000-143480600 Enhancers NHLF lung
46 chr6:143479200-143479400 Enhancers Brain Hippocampus Middle brain
47 chr6:143479200-143479600 Enhancers Adipose Nuclei Adipose
48 chr6:143479200-143479600 Enhancers Esophagus oesophagus
49 chr6:143479200-143479600 Enhancers Gastric stomach
50 chr6:143479200-143479600 Enhancers Rectal Mucosa Donor 31 rectum

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Last update: Aug 31, 2015