Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:34288854..34291341-chr3:34298518..34300242,2	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs13061194	1.00[ASN][1000 genomes]
rs13067818	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13075807	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13080986	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17280089	0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2139172	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34050472	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34272332	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34475061	1.00[ASN][1000 genomes]
rs34633026	0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs34811734	0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs34915338	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35368076	0.88[EUR][1000 genomes]
rs35489200	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4459843	0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs71325180	1.00[ASN][1000 genomes]
rs71325181	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73827388	1.00[ASN][1000 genomes]
rs7630319	1.00[ASN][1000 genomes]
rs7640851	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7652464	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9831758	1.00[ASN][1000 genomes]
rs9852050	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1001599	chr3:34149575-34437701	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv536533	chr3:34149575-34437701	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	nsv876682	chr3:34149814-34401451	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	nsv916961	chr3:34203879-34506554	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:34285800-34293600	Weak transcription	Aorta	Aorta
2	chr3:34289400-34291200	Enhancers	GM12878-XiMat	blood
3	chr3:34289600-34291200	Enhancers	Dnd41	blood
4	chr3:34289800-34291400	Enhancers	Thymus	Thymus
5	chr3:34290000-34291200	Enhancers	Fetal Thymus	thymus
6	chr3:34290400-34291200	Enhancers	Primary T helper naive cells from peripheral blood	blood

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