The 2.0 version of rSNPBase

Variant report

Variant rs56297666
Chromosome Location chr2:160902023-160902024
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:160828600-160907200 Weak transcription Small Intestine intestine
2 chr2:160879400-160908000 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr2:160879800-160907800 Weak transcription NHEK skin
4 chr2:160881200-160912000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr2:160881200-160913400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr2:160884000-160911600 Weak transcription Fetal Kidney kidney
7 chr2:160888000-160902800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr2:160890600-160907800 Weak transcription Fetal Adrenal Gland Adrenal Gland
9 chr2:160891000-160902200 Strong transcription Fetal Intestine Large intestine
10 chr2:160891200-160905600 Weak transcription HSMM muscle
11 chr2:160893200-160902200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr2:160895200-160911600 Weak transcription HMEC breast
13 chr2:160896200-160907800 Weak transcription Colonic Mucosa Colon
14 chr2:160896400-160907800 Weak transcription Aorta Aorta
15 chr2:160896800-160908600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr2:160897000-160907800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr2:160897600-160907000 Weak transcription Colon Smooth Muscle Colon
18 chr2:160897600-160907400 Weak transcription Rectal Smooth Muscle rectum
19 chr2:160897600-160907600 Weak transcription Stomach Smooth Muscle stomach
20 chr2:160898000-160903200 Strong transcription Fetal Intestine Small intestine
21 chr2:160899000-160903600 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr2:160899000-160907600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr2:160899200-160907800 Weak transcription NHDF-Ad bronchial
24 chr2:160899800-160907600 Weak transcription HUVEC blood vessel
25 chr2:160900000-160907800 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr2:160900200-160902400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr2:160900200-160907800 Weak transcription NH-A brain
28 chr2:160900200-160908000 Weak transcription ES-I3 Cell Line embryonic stem cell
29 chr2:160900400-160907800 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr2:160900400-160908000 Weak transcription HSMMtube muscle
31 chr2:160900600-160907800 Weak transcription Fetal Stomach stomach
32 chr2:160901400-160902200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr2:160901400-160903000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr2:160901400-160911800 Weak transcription Adipose Nuclei Adipose
35 chr2:160901600-160906800 Weak transcription Duodenum Mucosa Duodenum
36 chr2:160901600-160907800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr2:160901600-160907800 Weak transcription Ovary ovary
38 chr2:160901600-160908000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr2:160901600-160911600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr2:160902000-160903800 Strong transcription Esophagus oesophagus

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Last update: Aug 31, 2015