The 2.0 version of rSNPBase

Variant report

Variant rs4665148
Chromosome Location chr2:160917901-160917902
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:160909000-160918200 Weak transcription Aorta Aorta
2 chr2:160912000-160918000 Weak transcription HMEC breast
3 chr2:160912400-160918000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr2:160913600-160918400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr2:160914400-160918400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr2:160914600-160918200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr2:160916800-160919600 Active TSS Fetal Kidney kidney
8 chr2:160917200-160918000 Enhancers Breast Myoepithelial Primary Cells Breast
9 chr2:160917200-160918000 Enhancers Spleen Spleen
10 chr2:160917200-160918200 Flanking Active TSS Duodenum Mucosa Duodenum
11 chr2:160917200-160918200 Enhancers Right Ventricle heart
12 chr2:160917200-160918200 Enhancers HUVEC blood vessel
13 chr2:160917400-160918000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr2:160917400-160918200 Weak transcription Right Atrium heart
15 chr2:160917400-160919200 Active TSS NH-A brain
16 chr2:160917400-160919200 Active TSS Osteobl bone
17 chr2:160917400-160919400 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr2:160917600-160918000 Flanking Active TSS Rectal Mucosa Donor 29 rectum
19 chr2:160917600-160918000 Flanking Active TSS HSMMtube muscle
20 chr2:160917600-160918200 Enhancers Muscle Satellite Cultured Cells --
21 chr2:160917600-160918200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
22 chr2:160917600-160918200 Enhancers Esophagus oesophagus
23 chr2:160917600-160918200 Enhancers Ovary ovary
24 chr2:160917600-160918200 Enhancers Thymus Thymus
25 chr2:160917600-160918400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
26 chr2:160917600-160918400 Flanking Active TSS Fetal Intestine Large intestine
27 chr2:160917800-160918000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr2:160917800-160918000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr2:160917800-160918000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr2:160917800-160918000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr2:160917800-160918000 Enhancers Colonic Mucosa Colon
32 chr2:160917800-160918000 Flanking Active TSS Colon Smooth Muscle Colon
33 chr2:160917800-160918000 Flanking Active TSS Fetal Intestine Small intestine
34 chr2:160917800-160918000 Flanking Active TSS NHDF-Ad bronchial
35 chr2:160917800-160918000 Flanking Active TSS NHEK skin
36 chr2:160917800-160918200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
37 chr2:160917800-160918400 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr2:160917800-160918400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr2:160917800-160918400 Flanking Active TSS Adipose Nuclei Adipose
40 chr2:160917800-160918400 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
41 chr2:160917800-160919000 Bivalent/Poised TSS Brain Hippocampus Middle brain
42 chr2:160917800-160919400 Active TSS Stomach Smooth Muscle stomach
43 chr2:160917800-160919600 Active TSS Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015