The 2.0 version of rSNPBase

Variant report

Variant rs56310174
Chromosome Location chr6:70447511-70447512
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:70380600-70455600 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr6:70380800-70467800 Weak transcription K562 blood
3 chr6:70405000-70468400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr6:70406600-70449400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr6:70406600-70457400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr6:70417400-70455600 Weak transcription Fetal Kidney kidney
7 chr6:70418600-70455800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr6:70426200-70455800 Weak transcription Brain Cingulate Gyrus brain
9 chr6:70429000-70455600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr6:70429000-70462400 Weak transcription Colon Smooth Muscle Colon
11 chr6:70429000-70467600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr6:70431400-70498600 Weak transcription Ovary ovary
13 chr6:70431600-70456000 Weak transcription Brain Hippocampus Middle brain
14 chr6:70431800-70450000 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr6:70431800-70455800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr6:70431800-70456200 Weak transcription Thymus Thymus
17 chr6:70432000-70447800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr6:70432000-70447800 Weak transcription Fetal Thymus thymus
19 chr6:70432000-70455600 Weak transcription Stomach Smooth Muscle stomach
20 chr6:70432000-70455800 Weak transcription Duodenum Mucosa Duodenum
21 chr6:70432000-70455800 Weak transcription Fetal Intestine Small intestine
22 chr6:70432000-70456000 Weak transcription Esophagus oesophagus
23 chr6:70432000-70456200 Weak transcription Aorta Aorta
24 chr6:70432000-70468200 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr6:70432000-70470400 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr6:70432000-70470400 Weak transcription Gastric stomach
27 chr6:70432000-70479800 Weak transcription Pancreas Pancrea
28 chr6:70432200-70450200 Weak transcription Primary T killer naive cells fromperipheralblood blood
29 chr6:70432200-70480000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr6:70432600-70461600 Weak transcription Rectal Smooth Muscle rectum
31 chr6:70435600-70448000 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr6:70435800-70455800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr6:70435800-70456000 Weak transcription Brain Substantia Nigra brain
34 chr6:70435800-70498800 Weak transcription Adipose Nuclei Adipose
35 chr6:70436000-70455600 Weak transcription Primary T cells fromperipheralblood blood
36 chr6:70436000-70455800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr6:70436000-70456000 Weak transcription Brain Angular Gyrus brain
38 chr6:70436000-70457200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
39 chr6:70436200-70449800 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr6:70436200-70455600 Weak transcription Primary hematopoietic stem cells blood
41 chr6:70437000-70455400 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr6:70437000-70455400 Weak transcription Left Ventricle heart
43 chr6:70441200-70463400 Weak transcription iPS-20b Cell Line embryonic stem cell
44 chr6:70442400-70455600 Weak transcription Fetal Stomach stomach
45 chr6:70442400-70498200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr6:70442400-70498400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr6:70443000-70468000 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr6:70443200-70448600 Strong transcription Primary B cells from cord blood blood
49 chr6:70443200-70450000 Weak transcription Liver Liver
50 chr6:70443400-70456200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015