The 2.0 version of rSNPBase

Variant report

Variant rs11965589
Chromosome Location chr6:70475004-70475005
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:70431400-70498600 Weak transcription Ovary ovary
2 chr6:70432000-70479800 Weak transcription Pancreas Pancrea
3 chr6:70432200-70480000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr6:70435800-70498800 Weak transcription Adipose Nuclei Adipose
5 chr6:70442400-70498200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr6:70442400-70498400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr6:70447800-70498400 Weak transcription Placenta Placenta
8 chr6:70448800-70489800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr6:70450800-70487600 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr6:70453800-70505600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr6:70456400-70483000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr6:70456600-70491000 Weak transcription Stomach Smooth Muscle stomach
13 chr6:70457200-70486800 Weak transcription Thymus Thymus
14 chr6:70457200-70489800 Weak transcription Esophagus oesophagus
15 chr6:70457200-70494800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr6:70457400-70485000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr6:70457400-70489800 Weak transcription Dnd41 blood
18 chr6:70457600-70484600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr6:70457600-70487400 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr6:70459600-70477200 Weak transcription Brain Cingulate Gyrus brain
21 chr6:70461800-70480600 Weak transcription Monocytes-CD14+_RO01746 blood
22 chr6:70463000-70492400 Weak transcription Colon Smooth Muscle Colon
23 chr6:70463800-70479800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr6:70466200-70479800 Weak transcription Fetal Stomach stomach
25 chr6:70466400-70487000 Weak transcription Primary monocytes fromperipheralblood blood
26 chr6:70467000-70480000 Weak transcription Primary T cells from cord blood blood
27 chr6:70467200-70481000 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr6:70468400-70484800 Weak transcription Brain Anterior Caudate brain
29 chr6:70468400-70485200 Weak transcription HSMMtube muscle
30 chr6:70468800-70478600 Weak transcription Liver Liver
31 chr6:70469000-70479800 Weak transcription Primary T regulatory cells fromperipheralblood blood
32 chr6:70469000-70479800 Weak transcription Small Intestine intestine
33 chr6:70469000-70483000 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr6:70469000-70483200 Weak transcription Primary T killer memory cells from peripheral blood blood
35 chr6:70469000-70490600 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr6:70469000-70492000 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr6:70470400-70485000 Weak transcription Brain Hippocampus Middle brain
38 chr6:70470800-70485400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
39 chr6:70471000-70481000 Weak transcription Left Ventricle heart
40 chr6:70471000-70483000 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr6:70471000-70495200 Weak transcription Gastric stomach
42 chr6:70471200-70491000 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr6:70471800-70479800 Weak transcription Fetal Muscle Leg muscle
44 chr6:70471800-70479800 Weak transcription Lung lung
45 chr6:70472400-70475800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr6:70472600-70490400 Weak transcription Primary T helper naive cells fromperipheralblood blood
47 chr6:70472600-70491800 Weak transcription Primary T killer naive cells fromperipheralblood blood
48 chr6:70472800-70480800 Weak transcription Primary T helper cells PMA-I stimulated --
49 chr6:70472800-70481000 Weak transcription Primary T cells fromperipheralblood blood
50 chr6:70472800-70485600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood

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Last update: Aug 31, 2015