The 2.0 version of rSNPBase

Variant report

Variant rs59727335
Chromosome Location chr6:70466178-70466179
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:70380800-70467800 Weak transcription K562 blood
2 chr6:70405000-70468400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr6:70429000-70467600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr6:70431400-70498600 Weak transcription Ovary ovary
5 chr6:70432000-70468200 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr6:70432000-70470400 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr6:70432000-70470400 Weak transcription Gastric stomach
8 chr6:70432000-70479800 Weak transcription Pancreas Pancrea
9 chr6:70432200-70480000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr6:70435800-70498800 Weak transcription Adipose Nuclei Adipose
11 chr6:70442400-70498200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr6:70442400-70498400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr6:70443000-70468000 Weak transcription HUES48 Cell Line embryonic stem cell
14 chr6:70446000-70470400 Weak transcription Psoas Muscle Psoas
15 chr6:70447800-70498400 Weak transcription Placenta Placenta
16 chr6:70448400-70470600 Weak transcription Right Ventricle heart
17 chr6:70448800-70489800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr6:70450600-70472000 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr6:70450800-70487600 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr6:70453800-70468600 Weak transcription Small Intestine intestine
21 chr6:70453800-70505600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr6:70456400-70483000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr6:70456600-70471600 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr6:70456600-70491000 Weak transcription Stomach Smooth Muscle stomach
25 chr6:70456800-70468000 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr6:70456800-70470600 Weak transcription Left Ventricle heart
27 chr6:70456800-70473400 Weak transcription Aorta Aorta
28 chr6:70457000-70466600 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr6:70457200-70468200 Weak transcription Liver Liver
30 chr6:70457200-70486800 Weak transcription Thymus Thymus
31 chr6:70457200-70489800 Weak transcription Esophagus oesophagus
32 chr6:70457200-70494800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr6:70457400-70485000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr6:70457400-70489800 Weak transcription Dnd41 blood
35 chr6:70457600-70473800 Weak transcription Primary hematopoietic stem cells blood
36 chr6:70457600-70484600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr6:70457600-70487400 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr6:70458200-70472400 Weak transcription Fetal Thymus thymus
39 chr6:70459000-70470000 Weak transcription Brain Hippocampus Middle brain
40 chr6:70459400-70474000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
41 chr6:70459600-70477200 Weak transcription Brain Cingulate Gyrus brain
42 chr6:70461200-70468800 Weak transcription Primary T helper cells fromperipheralblood blood
43 chr6:70461600-70468600 Weak transcription Primary T regulatory cells fromperipheralblood blood
44 chr6:70461800-70480600 Weak transcription Monocytes-CD14+_RO01746 blood
45 chr6:70463000-70492400 Weak transcription Colon Smooth Muscle Colon
46 chr6:70463600-70468200 Weak transcription Primary B cells from peripheral blood blood
47 chr6:70463800-70473800 Weak transcription iPS-20b Cell Line embryonic stem cell
48 chr6:70463800-70479800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr6:70465400-70468000 Weak transcription HUES64 Cell Line embryonic stem cell
50 chr6:70465600-70467200 Strong transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015