The 2.0 version of rSNPBase

Variant report

Variant rs61572016
Chromosome Location chr6:70490845-70490846
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:70431400-70498600 Weak transcription Ovary ovary
2 chr6:70435800-70498800 Weak transcription Adipose Nuclei Adipose
3 chr6:70442400-70498200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr6:70442400-70498400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr6:70447800-70498400 Weak transcription Placenta Placenta
6 chr6:70453800-70505600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr6:70456600-70491000 Weak transcription Stomach Smooth Muscle stomach
8 chr6:70457200-70494800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr6:70463000-70492400 Weak transcription Colon Smooth Muscle Colon
10 chr6:70469000-70492000 Weak transcription Fetal Adrenal Gland Adrenal Gland
11 chr6:70471000-70495200 Weak transcription Gastric stomach
12 chr6:70471200-70491000 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr6:70472600-70491800 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr6:70473000-70499000 Weak transcription Fetal Muscle Trunk muscle
15 chr6:70474200-70495000 Weak transcription Duodenum Mucosa Duodenum
16 chr6:70474400-70494200 Weak transcription Psoas Muscle Psoas
17 chr6:70477200-70505200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr6:70477600-70501600 Weak transcription Fetal Kidney kidney
19 chr6:70477600-70505400 Weak transcription NHDF-Ad bronchial
20 chr6:70478400-70505000 Weak transcription Fetal Brain Male brain
21 chr6:70478600-70493000 Weak transcription Colonic Mucosa Colon
22 chr6:70478800-70498600 Weak transcription HSMM muscle
23 chr6:70479200-70492000 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr6:70479600-70500600 Weak transcription Brain Germinal Matrix brain
25 chr6:70479800-70506200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr6:70480200-70494200 Weak transcription Small Intestine intestine
27 chr6:70480200-70506000 Weak transcription Lung lung
28 chr6:70480400-70492000 Weak transcription Liver Liver
29 chr6:70481400-70498800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr6:70481400-70502200 Weak transcription Spleen Spleen
31 chr6:70481600-70495000 Weak transcription Right Ventricle heart
32 chr6:70481600-70501000 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr6:70481600-70505000 Weak transcription Aorta Aorta
34 chr6:70482000-70491800 Weak transcription K562 blood
35 chr6:70483200-70499200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr6:70483200-70500800 Weak transcription Fetal Brain Female brain
37 chr6:70483400-70501200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr6:70484200-70494400 Weak transcription Rectal Smooth Muscle rectum
39 chr6:70484200-70498600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr6:70484200-70505200 Weak transcription Primary hematopoietic stem cells blood
41 chr6:70485200-70492800 Strong transcription Monocytes-CD14+_RO01746 blood
42 chr6:70485600-70498400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr6:70486200-70492200 Strong transcription Primary B cells from cord blood blood
44 chr6:70486400-70494200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
45 chr6:70486400-70501000 Weak transcription HUES48 Cell Line embryonic stem cell
46 chr6:70486400-70501000 Weak transcription Brain Angular Gyrus brain
47 chr6:70486400-70501000 Weak transcription Brain Hippocampus Middle brain
48 chr6:70486600-70494200 Weak transcription Primary T helper naive cells from peripheral blood blood
49 chr6:70486600-70500400 Weak transcription Brain Cingulate Gyrus brain
50 chr6:70486600-70501000 Weak transcription Brain Anterior Caudate brain

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Last update: Aug 31, 2015