The 2.0 version of rSNPBase

Variant report

Variant rs57269218
Chromosome Location chr6:37802072-37802073
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:37791200-37820000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr6:37791400-37810200 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr6:37791400-37813400 Weak transcription Stomach Smooth Muscle stomach
4 chr6:37791400-37816000 Weak transcription iPS-18 Cell Line embryonic stem cell
5 chr6:37793800-37813600 Weak transcription NH-A brain
6 chr6:37794000-37819800 Weak transcription Rectal Smooth Muscle rectum
7 chr6:37794400-37805200 Weak transcription Primary monocytes fromperipheralblood blood
8 chr6:37795000-37813800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
9 chr6:37795000-37825600 Weak transcription Primary T regulatory cells fromperipheralblood blood
10 chr6:37795800-37802200 Weak transcription NHLF lung
11 chr6:37795800-37813400 Weak transcription HSMMtube muscle
12 chr6:37796000-37812800 Weak transcription Colonic Mucosa Colon
13 chr6:37796000-37813200 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr6:37796000-37813800 Weak transcription NHDF-Ad bronchial
15 chr6:37796000-37815600 Weak transcription Brain Inferior Temporal Lobe brain
16 chr6:37796000-37828800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr6:37796000-37830600 Weak transcription Hela-S3 cervix
18 chr6:37796200-37802400 Weak transcription Fetal Intestine Large intestine
19 chr6:37796200-37811400 Weak transcription Muscle Satellite Cultured Cells --
20 chr6:37796200-37813200 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr6:37796400-37803400 Weak transcription Primary neutrophils fromperipheralblood blood
22 chr6:37797800-37808200 Weak transcription Brain Anterior Caudate brain
23 chr6:37798400-37803400 Weak transcription Primary T killer memory cells from peripheral blood blood
24 chr6:37798400-37805600 Weak transcription Osteobl bone
25 chr6:37798400-37812800 Weak transcription HSMM muscle
26 chr6:37798400-37815200 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr6:37798400-37815800 Weak transcription Fetal Heart heart
28 chr6:37799000-37808400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr6:37799400-37817400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr6:37799600-37806600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr6:37799600-37808000 Weak transcription K562 blood
32 chr6:37799600-37809400 Weak transcription Lung lung
33 chr6:37799600-37811200 Weak transcription Brain Substantia Nigra brain
34 chr6:37799600-37811800 Weak transcription Placenta Placenta
35 chr6:37799600-37812800 Weak transcription NHEK skin
36 chr6:37799600-37813400 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr6:37799600-37825800 Weak transcription Esophagus oesophagus
38 chr6:37799800-37805800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr6:37799800-37825400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr6:37800000-37808200 Weak transcription Liver Liver
41 chr6:37800200-37802400 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr6:37800200-37802400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr6:37800200-37802800 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
44 chr6:37800200-37812800 Weak transcription Gastric stomach
45 chr6:37800200-37813400 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr6:37800200-37830200 Weak transcription Ovary ovary
47 chr6:37800200-37836200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr6:37800400-37802200 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
49 chr6:37800400-37802200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr6:37800400-37802600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015