Variant report

Variant rs73417997
Chromosome Location chr6:38003485-38003486
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:37985000-38030200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr6:37990600-38005800 Weak transcription Stomach Smooth Muscle stomach
3 chr6:37994400-38011400 Weak transcription Aorta Aorta
4 chr6:37995800-38003800 Weak transcription Skeletal Muscle Male skeletal muscle
5 chr6:37995800-38005400 Weak transcription Psoas Muscle Psoas
6 chr6:37995800-38008000 Weak transcription Fetal Muscle Leg muscle
7 chr6:37995800-38013000 Weak transcription Fetal Thymus thymus
8 chr6:37995800-38020600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
9 chr6:37996000-38015400 Weak transcription HSMMtube muscle
10 chr6:37996200-38005400 Weak transcription Brain Cingulate Gyrus brain
11 chr6:37996200-38008000 Weak transcription Monocytes-CD14+_RO01746 blood
12 chr6:37996200-38008600 Weak transcription HUVEC blood vessel
13 chr6:37997600-38007000 Weak transcription A549 lung
14 chr6:37998600-38029200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr6:37999400-38004800 Weak transcription HUES6 Cell Line embryonic stem cell
16 chr6:37999400-38005000 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr6:37999800-38008400 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr6:37999800-38017600 Weak transcription Right Atrium heart
19 chr6:37999800-38018600 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr6:38000200-38004000 Enhancers Pancreatic Islets Pancreatic Islet
21 chr6:38000400-38004000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
22 chr6:38000400-38004200 Enhancers Brain Hippocampus Middle brain
23 chr6:38000600-38005000 Weak transcription Fetal Heart heart
24 chr6:38000800-38005000 Weak transcription HUES64 Cell Line embryonic stem cell
25 chr6:38001000-38003600 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr6:38001000-38004000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr6:38001000-38028600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr6:38001200-38003600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
29 chr6:38001200-38003800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
30 chr6:38001200-38003800 Enhancers Liver Liver
31 chr6:38001200-38004000 Enhancers Duodenum Smooth Muscle Duodenum
32 chr6:38001400-38004000 Enhancers Stomach Mucosa stomach
33 chr6:38001600-38003600 Weak transcription Brain Angular Gyrus brain
34 chr6:38001600-38005000 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr6:38001800-38004200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr6:38002000-38004200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr6:38002200-38003600 Weak transcription Small Intestine intestine
38 chr6:38002200-38004800 Weak transcription HUES48 Cell Line embryonic stem cell
39 chr6:38002400-38003600 Enhancers NHDF-Ad bronchial
40 chr6:38002400-38004200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr6:38002400-38005000 Weak transcription iPS-20b Cell Line embryonic stem cell
42 chr6:38002400-38029400 Weak transcription Primary T cells fromperipheralblood blood
43 chr6:38002600-38006600 Weak transcription NHLF lung
44 chr6:38002600-38008600 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr6:38002800-38003600 Weak transcription Primary B cells from cord blood blood
46 chr6:38002800-38003800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr6:38002800-38003800 Weak transcription Adipose Nuclei Adipose
48 chr6:38002800-38004200 Enhancers HepG2 liver
49 chr6:38002800-38017800 Weak transcription HSMM muscle
50 chr6:38002800-38024400 Weak transcription Fetal Stomach stomach

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