Variant report

Variant rs56178553
Chromosome Location chr6:38097548-38097549
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:38045600-38107000 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr6:38057200-38109200 Weak transcription K562 blood
3 chr6:38060000-38099400 Weak transcription Right Ventricle heart
4 chr6:38060000-38108200 Weak transcription Ovary ovary
5 chr6:38063800-38099000 Weak transcription NH-A brain
6 chr6:38072200-38108400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr6:38075200-38118200 Weak transcription Colonic Mucosa Colon
8 chr6:38075400-38103800 Weak transcription Pancreas Pancrea
9 chr6:38076600-38104000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr6:38078800-38099000 Weak transcription NHDF-Ad bronchial
11 chr6:38078800-38109000 Weak transcription Rectal Smooth Muscle rectum
12 chr6:38078800-38111000 Weak transcription Fetal Kidney kidney
13 chr6:38078800-38111000 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr6:38079600-38113800 Weak transcription Placenta Amnion Placenta Amnion
15 chr6:38080400-38104800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr6:38081800-38121800 Weak transcription Psoas Muscle Psoas
17 chr6:38083800-38103800 Weak transcription Esophagus oesophagus
18 chr6:38084000-38122200 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr6:38084600-38124200 Weak transcription Hela-S3 cervix
20 chr6:38085800-38099400 Weak transcription Colon Smooth Muscle Colon
21 chr6:38086400-38099200 Weak transcription NHLF lung
22 chr6:38086600-38102400 Weak transcription Stomach Smooth Muscle stomach
23 chr6:38087200-38101600 Weak transcription Brain Angular Gyrus brain
24 chr6:38087600-38099400 Weak transcription Brain Cingulate Gyrus brain
25 chr6:38087600-38100400 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr6:38087600-38101800 Weak transcription Brain Hippocampus Middle brain
27 chr6:38087600-38103800 Weak transcription Brain Inferior Temporal Lobe brain
28 chr6:38087600-38104800 Weak transcription iPS-15b Cell Line embryonic stem cell
29 chr6:38087600-38118800 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr6:38087800-38104600 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr6:38088000-38102200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
32 chr6:38088000-38104800 Weak transcription ES-I3 Cell Line embryonic stem cell
33 chr6:38088200-38099000 Weak transcription Osteobl bone
34 chr6:38088600-38099200 Weak transcription Muscle Satellite Cultured Cells --
35 chr6:38089200-38099000 Weak transcription HSMMtube muscle
36 chr6:38089200-38100000 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr6:38089200-38103800 Weak transcription Gastric stomach
38 chr6:38089600-38106200 Weak transcription Placenta Placenta
39 chr6:38089800-38099400 Weak transcription Left Ventricle heart
40 chr6:38090000-38111000 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr6:38090200-38099200 Weak transcription Adipose Nuclei Adipose
42 chr6:38090400-38106200 Weak transcription NHEK skin
43 chr6:38090800-38099000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr6:38091200-38099000 Weak transcription HMEC breast
45 chr6:38091200-38099200 Weak transcription HSMM muscle
46 chr6:38091200-38106200 Weak transcription Dnd41 blood
47 chr6:38091200-38119800 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr6:38091400-38098800 Weak transcription Primary T helper cells PMA-I stimulated --
49 chr6:38091400-38100400 Weak transcription HepG2 liver
50 chr6:38091400-38109400 Weak transcription Primary T cells fromperipheralblood blood

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