The 2.0 version of rSNPBase

Variant report

Variant rs9462389
Chromosome Location chr6:38113423-38113424
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:38075200-38118200 Weak transcription Colonic Mucosa Colon
2 chr6:38079600-38113800 Weak transcription Placenta Amnion Placenta Amnion
3 chr6:38081800-38121800 Weak transcription Psoas Muscle Psoas
4 chr6:38084000-38122200 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr6:38084600-38124200 Weak transcription Hela-S3 cervix
6 chr6:38087600-38118800 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr6:38091200-38119800 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr6:38091400-38116000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr6:38091400-38141800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr6:38092800-38117000 Weak transcription Spleen Spleen
11 chr6:38095200-38122600 Weak transcription A549 lung
12 chr6:38096000-38116000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr6:38099600-38117800 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr6:38099800-38119600 Weak transcription Aorta Aorta
15 chr6:38100400-38113600 Weak transcription NHLF lung
16 chr6:38100600-38114000 Weak transcription NH-A brain
17 chr6:38101200-38113800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr6:38103000-38127200 Weak transcription Colon Smooth Muscle Colon
19 chr6:38104000-38118400 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr6:38104600-38113800 Weak transcription Esophagus oesophagus
21 chr6:38104600-38119600 Weak transcription Gastric stomach
22 chr6:38104600-38119600 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr6:38104800-38113600 Weak transcription NHDF-Ad bronchial
24 chr6:38105600-38116200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr6:38106000-38116200 Weak transcription Fetal Thymus thymus
26 chr6:38106600-38113800 Strong transcription Primary B cells from cord blood blood
27 chr6:38107000-38116200 Weak transcription Dnd41 blood
28 chr6:38107400-38114600 Strong transcription Primary T cells from cord blood blood
29 chr6:38107400-38116400 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr6:38108800-38113800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr6:38108800-38114400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
32 chr6:38108800-38114800 Enhancers Brain Anterior Caudate brain
33 chr6:38109200-38123000 Weak transcription Ovary ovary
34 chr6:38109200-38129000 Weak transcription Rectal Smooth Muscle rectum
35 chr6:38109600-38114400 Strong transcription Fetal Intestine Small intestine
36 chr6:38109800-38114200 Strong transcription Primary monocytes fromperipheralblood blood
37 chr6:38110200-38122200 Weak transcription HUVEC blood vessel
38 chr6:38110600-38113800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr6:38110600-38116000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr6:38110600-38116000 Weak transcription Primary T cells fromperipheralblood blood
41 chr6:38111000-38113600 Weak transcription Osteobl bone
42 chr6:38111000-38117400 Weak transcription Right Atrium heart
43 chr6:38111000-38118600 Weak transcription Primary neutrophils fromperipheralblood blood
44 chr6:38111200-38114000 Weak transcription Placenta Placenta
45 chr6:38111200-38114400 Strong transcription HepG2 liver
46 chr6:38111200-38114600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr6:38111200-38116200 Weak transcription Primary T regulatory cells fromperipheralblood blood
48 chr6:38111200-38116400 Weak transcription Primary hematopoietic stem cells short term culture blood
49 chr6:38111200-38119800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
50 chr6:38111200-38122400 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015