The 2.0 version of rSNPBase

Variant report

Variant rs11758747
Chromosome Location chr6:38056271-38056272
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:38030800-38085800 Weak transcription Primary T helper naive cells fromperipheralblood blood
2 chr6:38031600-38059600 Weak transcription Spleen Spleen
3 chr6:38031600-38061600 Weak transcription Brain Germinal Matrix brain
4 chr6:38033000-38063400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr6:38035000-38084000 Weak transcription Stomach Smooth Muscle stomach
6 chr6:38036400-38075000 Weak transcription Thymus Thymus
7 chr6:38042800-38060000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr6:38045400-38058800 Weak transcription Fetal Kidney kidney
9 chr6:38045600-38107000 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr6:38045800-38058600 Weak transcription Fetal Lung lung
11 chr6:38045800-38059400 Weak transcription Fetal Heart heart
12 chr6:38045800-38059600 Weak transcription Aorta Aorta
13 chr6:38045800-38079800 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr6:38046000-38084200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr6:38046200-38062600 Weak transcription HUES64 Cell Line embryonic stem cell
16 chr6:38046400-38063200 Weak transcription iPS-18 Cell Line embryonic stem cell
17 chr6:38046600-38074200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr6:38047000-38062800 Weak transcription HUES48 Cell Line embryonic stem cell
19 chr6:38047200-38058600 Weak transcription Rectal Smooth Muscle rectum
20 chr6:38047200-38058600 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr6:38047400-38058800 Weak transcription Brain Angular Gyrus brain
22 chr6:38047600-38076200 Weak transcription Fetal Stomach stomach
23 chr6:38047800-38057400 Weak transcription Colon Smooth Muscle Colon
24 chr6:38047800-38062400 Weak transcription HepG2 liver
25 chr6:38048000-38060800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr6:38048000-38073000 Weak transcription Small Intestine intestine
27 chr6:38048200-38056400 Weak transcription K562 blood
28 chr6:38048400-38056400 Strong transcription Primary B cells from cord blood blood
29 chr6:38049000-38060800 Weak transcription A549 lung
30 chr6:38049000-38061200 Weak transcription NHDF-Ad bronchial
31 chr6:38049200-38058200 Weak transcription Pancreatic Islets Pancreatic Islet
32 chr6:38049200-38062200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr6:38049200-38062400 Weak transcription NHLF lung
34 chr6:38049200-38062600 Weak transcription HMEC breast
35 chr6:38049200-38072600 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr6:38049200-38077400 Weak transcription Fetal Intestine Small intestine
37 chr6:38049400-38062400 Weak transcription Osteobl bone
38 chr6:38049400-38084400 Weak transcription Hela-S3 cervix
39 chr6:38050400-38059200 Weak transcription HUVEC blood vessel
40 chr6:38050600-38062800 Weak transcription iPS-20b Cell Line embryonic stem cell
41 chr6:38051200-38066800 Weak transcription GM12878-XiMat blood
42 chr6:38051400-38062400 Weak transcription NHEK skin
43 chr6:38051400-38074800 Weak transcription Fetal Adrenal Gland Adrenal Gland
44 chr6:38051400-38076200 Weak transcription Fetal Muscle Leg muscle
45 chr6:38051600-38057600 Weak transcription Left Ventricle heart
46 chr6:38051600-38059400 Weak transcription Ovary ovary
47 chr6:38051600-38059600 Weak transcription Esophagus oesophagus
48 chr6:38051600-38067800 Weak transcription Primary hematopoietic stem cells short term culture blood
49 chr6:38051600-38076200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
50 chr6:38051600-38078200 Weak transcription Rectal Mucosa Donor 31 rectum

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Last update: Aug 31, 2015