The 2.0 version of rSNPBase

Variant report

Variant rs12663207
Chromosome Location chr6:38089208-38089209
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:38045600-38107000 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr6:38053000-38090400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr6:38057200-38109200 Weak transcription K562 blood
4 chr6:38059800-38091600 Weak transcription Spleen Spleen
5 chr6:38060000-38092000 Weak transcription Aorta Aorta
6 chr6:38060000-38099400 Weak transcription Right Ventricle heart
7 chr6:38060000-38108200 Weak transcription Ovary ovary
8 chr6:38063800-38099000 Weak transcription NH-A brain
9 chr6:38071800-38091400 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr6:38072200-38108400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr6:38075200-38092000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr6:38075200-38118200 Weak transcription Colonic Mucosa Colon
13 chr6:38075400-38103800 Weak transcription Pancreas Pancrea
14 chr6:38076400-38091400 Strong transcription Primary B cells from cord blood blood
15 chr6:38076600-38104000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr6:38078800-38099000 Weak transcription NHDF-Ad bronchial
17 chr6:38078800-38109000 Weak transcription Rectal Smooth Muscle rectum
18 chr6:38078800-38111000 Weak transcription Fetal Kidney kidney
19 chr6:38078800-38111000 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr6:38079600-38113800 Weak transcription Placenta Amnion Placenta Amnion
21 chr6:38080400-38104800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr6:38081800-38121800 Weak transcription Psoas Muscle Psoas
23 chr6:38082600-38094400 Weak transcription H1 Cell Line embryonic stem cell
24 chr6:38082800-38091600 Strong transcription Primary T cells from cord blood blood
25 chr6:38083200-38095800 Strong transcription Monocytes-CD14+_RO01746 blood
26 chr6:38083400-38091600 Weak transcription Small Intestine intestine
27 chr6:38083600-38091400 Strong transcription HepG2 liver
28 chr6:38083600-38092600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
29 chr6:38083600-38094000 Strong transcription Primary monocytes fromperipheralblood blood
30 chr6:38083800-38091600 Strong transcription Primary B cells from peripheral blood blood
31 chr6:38083800-38092000 Strong transcription Fetal Thymus thymus
32 chr6:38083800-38103800 Weak transcription Esophagus oesophagus
33 chr6:38084000-38091200 Strong transcription Dnd41 blood
34 chr6:38084000-38122200 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr6:38084200-38089600 Strong transcription Placenta Placenta
36 chr6:38084200-38091400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
37 chr6:38084200-38091600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr6:38084200-38092200 Strong transcription Fetal Adrenal Gland Adrenal Gland
39 chr6:38084200-38095200 Strong transcription Primary hematopoietic stem cells short term culture blood
40 chr6:38084400-38089600 Weak transcription NHEK skin
41 chr6:38084400-38090200 Strong transcription Adipose Nuclei Adipose
42 chr6:38084400-38091200 Strong transcription Fetal Intestine Large intestine
43 chr6:38084400-38091400 Strong transcription Liver Liver
44 chr6:38084400-38092000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
45 chr6:38084400-38092200 Strong transcription Primary neutrophils fromperipheralblood blood
46 chr6:38084600-38092000 Weak transcription Lung lung
47 chr6:38084600-38124200 Weak transcription Hela-S3 cervix
48 chr6:38084800-38092400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr6:38085400-38090000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr6:38085400-38093800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015