Variant report
| Variant | rs57525562 |
|---|---|
| Chromosome Location | chr6:38061052-38061053 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:38030800-38085800 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 2 | chr6:38031600-38061600 | Weak transcription | Brain Germinal Matrix | brain |
| 3 | chr6:38033000-38063400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 4 | chr6:38035000-38084000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 5 | chr6:38036400-38075000 | Weak transcription | Thymus | Thymus |
| 6 | chr6:38045600-38107000 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 7 | chr6:38045800-38079800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 8 | chr6:38046000-38084200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 9 | chr6:38046200-38062600 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 10 | chr6:38046400-38063200 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 11 | chr6:38046600-38074200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 12 | chr6:38047000-38062800 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 13 | chr6:38047600-38076200 | Weak transcription | Fetal Stomach | stomach |
| 14 | chr6:38047800-38062400 | Weak transcription | HepG2 | liver |
| 15 | chr6:38048000-38073000 | Weak transcription | Small Intestine | intestine |
| 16 | chr6:38049000-38061200 | Weak transcription | NHDF-Ad | bronchial |
| 17 | chr6:38049200-38062200 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 18 | chr6:38049200-38062400 | Weak transcription | NHLF | lung |
| 19 | chr6:38049200-38062600 | Weak transcription | HMEC | breast |
| 20 | chr6:38049200-38072600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 21 | chr6:38049200-38077400 | Weak transcription | Fetal Intestine Small | intestine |
| 22 | chr6:38049400-38062400 | Weak transcription | Osteobl | bone |
| 23 | chr6:38049400-38084400 | Weak transcription | Hela-S3 | cervix |
| 24 | chr6:38050600-38062800 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 25 | chr6:38051200-38066800 | Weak transcription | GM12878-XiMat | blood |
| 26 | chr6:38051400-38062400 | Weak transcription | NHEK | skin |
| 27 | chr6:38051400-38074800 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 28 | chr6:38051400-38076200 | Weak transcription | Fetal Muscle Leg | muscle |
| 29 | chr6:38051600-38067800 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 30 | chr6:38051600-38076200 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 31 | chr6:38051600-38078200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 32 | chr6:38052000-38074800 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 33 | chr6:38052800-38083800 | Weak transcription | Primary hematopoietic stem cells | blood |
| 34 | chr6:38052800-38084000 | Weak transcription | Dnd41 | blood |
| 35 | chr6:38053000-38062200 | Weak transcription | NH-A | brain |
| 36 | chr6:38053000-38062600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 37 | chr6:38053000-38075800 | Weak transcription | Duodenum Mucosa | Duodenum |
| 38 | chr6:38053000-38078200 | Weak transcription | Fetal Intestine Large | intestine |
| 39 | chr6:38053000-38084000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 40 | chr6:38053000-38090400 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 41 | chr6:38053200-38061400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 42 | chr6:38053200-38061600 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 43 | chr6:38053200-38062200 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 44 | chr6:38053200-38078200 | Weak transcription | Fetal Thymus | thymus |
| 45 | chr6:38053200-38078200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 46 | chr6:38053200-38080000 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 47 | chr6:38053200-38084000 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 48 | chr6:38054000-38062400 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 49 | chr6:38054200-38061600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 50 | chr6:38054200-38080000 | Weak transcription | Psoas Muscle | Psoas |
