Variant report
| Variant | rs57208246 |
|---|---|
| Chromosome Location | chr6:38111170-38111171 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:38075200-38118200 | Weak transcription | Colonic Mucosa | Colon |
| 2 | chr6:38079600-38113800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 3 | chr6:38081800-38121800 | Weak transcription | Psoas Muscle | Psoas |
| 4 | chr6:38084000-38122200 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 5 | chr6:38084600-38124200 | Weak transcription | Hela-S3 | cervix |
| 6 | chr6:38087600-38118800 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 7 | chr6:38091200-38119800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 8 | chr6:38091400-38116000 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 9 | chr6:38091400-38141800 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 10 | chr6:38092800-38112200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 11 | chr6:38092800-38117000 | Weak transcription | Spleen | Spleen |
| 12 | chr6:38095200-38122600 | Weak transcription | A549 | lung |
| 13 | chr6:38096000-38116000 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 14 | chr6:38099600-38117800 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 15 | chr6:38099800-38119600 | Weak transcription | Aorta | Aorta |
| 16 | chr6:38100000-38112800 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 17 | chr6:38100200-38111200 | Weak transcription | HMEC | breast |
| 18 | chr6:38100400-38113600 | Weak transcription | NHLF | lung |
| 19 | chr6:38100600-38114000 | Weak transcription | NH-A | brain |
| 20 | chr6:38101200-38113800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 21 | chr6:38103000-38127200 | Weak transcription | Colon Smooth Muscle | Colon |
| 22 | chr6:38103200-38112800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 23 | chr6:38104000-38118400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 24 | chr6:38104400-38111600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 25 | chr6:38104600-38112000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 26 | chr6:38104600-38112200 | Weak transcription | Pancreas | Pancrea |
| 27 | chr6:38104600-38112800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 28 | chr6:38104600-38113800 | Weak transcription | Esophagus | oesophagus |
| 29 | chr6:38104600-38119600 | Weak transcription | Gastric | stomach |
| 30 | chr6:38104600-38119600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 31 | chr6:38104800-38113600 | Weak transcription | NHDF-Ad | bronchial |
| 32 | chr6:38105600-38112200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 33 | chr6:38105600-38116200 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 34 | chr6:38105800-38111800 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 35 | chr6:38106000-38116200 | Weak transcription | Fetal Thymus | thymus |
| 36 | chr6:38106600-38113800 | Strong transcription | Primary B cells from cord blood | blood |
| 37 | chr6:38106800-38112200 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 38 | chr6:38107000-38112000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 39 | chr6:38107000-38116200 | Weak transcription | Dnd41 | blood |
| 40 | chr6:38107200-38111200 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 41 | chr6:38107200-38112600 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 42 | chr6:38107400-38111600 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 43 | chr6:38107400-38112800 | Weak transcription | NHEK | skin |
| 44 | chr6:38107400-38114600 | Strong transcription | Primary T cells from cord blood | blood |
| 45 | chr6:38107400-38116400 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 46 | chr6:38107600-38111400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 47 | chr6:38107600-38112200 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 48 | chr6:38107600-38112400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 49 | chr6:38108000-38111800 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 50 | chr6:38108200-38111600 | Weak transcription | Duodenum Mucosa | Duodenum |
