Variant report
| Variant | rs56688119 |
|---|---|
| Chromosome Location | chr6:38024899-38024900 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:37985000-38030200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 2 | chr6:37998600-38029200 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 3 | chr6:38001000-38028600 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 4 | chr6:38002400-38029400 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 5 | chr6:38003000-38025000 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 6 | chr6:38003600-38025400 | Weak transcription | NHDF-Ad | bronchial |
| 7 | chr6:38004200-38029200 | Weak transcription | Primary B cells from cord blood | blood |
| 8 | chr6:38007400-38025400 | Weak transcription | NH-A | brain |
| 9 | chr6:38008400-38028400 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 10 | chr6:38010600-38029000 | Weak transcription | Primary hematopoietic stem cells | blood |
| 11 | chr6:38011800-38029400 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 12 | chr6:38012400-38029400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 13 | chr6:38015400-38029600 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 14 | chr6:38015600-38029400 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 15 | chr6:38016200-38029400 | Weak transcription | Primary B cells from peripheral blood | blood |
| 16 | chr6:38017200-38055000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 17 | chr6:38017400-38031000 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 18 | chr6:38018200-38025800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 19 | chr6:38018400-38025600 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 20 | chr6:38018400-38030000 | Weak transcription | Fetal Intestine Small | intestine |
| 21 | chr6:38018600-38025600 | Weak transcription | Osteobl | bone |
| 22 | chr6:38019000-38031800 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 23 | chr6:38019400-38029400 | Weak transcription | Right Ventricle | heart |
| 24 | chr6:38019400-38029400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 25 | chr6:38020000-38029400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 26 | chr6:38020200-38029200 | Weak transcription | A549 | lung |
| 27 | chr6:38020200-38030000 | Weak transcription | Fetal Brain Female | brain |
| 28 | chr6:38020400-38046200 | Weak transcription | Stomach Mucosa | stomach |
| 29 | chr6:38020800-38025400 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 30 | chr6:38020800-38029400 | Weak transcription | Spleen | Spleen |
| 31 | chr6:38021000-38025400 | Weak transcription | NHEK | skin |
| 32 | chr6:38021000-38029200 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 33 | chr6:38021200-38025600 | Weak transcription | Small Intestine | intestine |
| 34 | chr6:38021400-38029400 | Weak transcription | Esophagus | oesophagus |
| 35 | chr6:38021400-38029400 | Weak transcription | Left Ventricle | heart |
| 36 | chr6:38021400-38029400 | Weak transcription | Lung | lung |
| 37 | chr6:38022400-38025200 | Enhancers | HUES48 Cell Line | embryonic stem cell |
| 38 | chr6:38022600-38030000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 39 | chr6:38023000-38054800 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 40 | chr6:38023200-38029200 | Weak transcription | K562 | blood |
| 41 | chr6:38023200-38029400 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 42 | chr6:38023200-38029400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 43 | chr6:38023200-38029800 | Weak transcription | Brain Anterior Caudate | brain |
| 44 | chr6:38023200-38052800 | Weak transcription | Gastric | stomach |
| 45 | chr6:38023400-38025200 | Weak transcription | GM12878-XiMat | blood |
| 46 | chr6:38023400-38026600 | Enhancers | Pancreatic Islets | Pancreatic Islet |
| 47 | chr6:38023400-38029400 | Weak transcription | Pancreas | Pancrea |
| 48 | chr6:38023600-38026600 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 49 | chr6:38023600-38029600 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 50 | chr6:38023800-38025000 | Enhancers | Colon Smooth Muscle | Colon |
