Variant report
| Variant | rs12663086 |
|---|---|
| Chromosome Location | chr6:38003934-38003935 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:37985000-38030200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 2 | chr6:37990600-38005800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 3 | chr6:37994400-38011400 | Weak transcription | Aorta | Aorta |
| 4 | chr6:37995800-38005400 | Weak transcription | Psoas Muscle | Psoas |
| 5 | chr6:37995800-38008000 | Weak transcription | Fetal Muscle Leg | muscle |
| 6 | chr6:37995800-38013000 | Weak transcription | Fetal Thymus | thymus |
| 7 | chr6:37995800-38020600 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 8 | chr6:37996000-38015400 | Weak transcription | HSMMtube | muscle |
| 9 | chr6:37996200-38005400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 10 | chr6:37996200-38008000 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 11 | chr6:37996200-38008600 | Weak transcription | HUVEC | blood vessel |
| 12 | chr6:37997600-38007000 | Weak transcription | A549 | lung |
| 13 | chr6:37998600-38029200 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 14 | chr6:37999400-38004800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 15 | chr6:37999400-38005000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 16 | chr6:37999800-38008400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 17 | chr6:37999800-38017600 | Weak transcription | Right Atrium | heart |
| 18 | chr6:37999800-38018600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 19 | chr6:38000200-38004000 | Enhancers | Pancreatic Islets | Pancreatic Islet |
| 20 | chr6:38000400-38004000 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
| 21 | chr6:38000400-38004200 | Enhancers | Brain Hippocampus Middle | brain |
| 22 | chr6:38000600-38005000 | Weak transcription | Fetal Heart | heart |
| 23 | chr6:38000800-38005000 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 24 | chr6:38001000-38004000 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 25 | chr6:38001000-38028600 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 26 | chr6:38001200-38004000 | Enhancers | Duodenum Smooth Muscle | Duodenum |
| 27 | chr6:38001400-38004000 | Enhancers | Stomach Mucosa | stomach |
| 28 | chr6:38001600-38005000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 29 | chr6:38001800-38004200 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 30 | chr6:38002000-38004200 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 31 | chr6:38002200-38004800 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 32 | chr6:38002400-38004200 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 33 | chr6:38002400-38005000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 34 | chr6:38002400-38029400 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 35 | chr6:38002600-38006600 | Weak transcription | NHLF | lung |
| 36 | chr6:38002600-38008600 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 37 | chr6:38002800-38004200 | Enhancers | HepG2 | liver |
| 38 | chr6:38002800-38017800 | Weak transcription | HSMM | muscle |
| 39 | chr6:38002800-38024400 | Weak transcription | Fetal Stomach | stomach |
| 40 | chr6:38003000-38004000 | Enhancers | Muscle Satellite Cultured Cells | -- |
| 41 | chr6:38003000-38005000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 42 | chr6:38003000-38005200 | Weak transcription | Duodenum Mucosa | Duodenum |
| 43 | chr6:38003000-38005400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 44 | chr6:38003000-38008400 | Weak transcription | Fetal Lung | lung |
| 45 | chr6:38003000-38008600 | Weak transcription | Brain Anterior Caudate | brain |
| 46 | chr6:38003000-38024800 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 47 | chr6:38003000-38025000 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 48 | chr6:38003200-38004200 | Enhancers | Brain Substantia Nigra | brain |
| 49 | chr6:38003200-38024400 | Weak transcription | Primary T cells from cord blood | blood |
| 50 | chr6:38003400-38004000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
