Variant report
| Variant | rs12662823 |
|---|---|
| Chromosome Location | chr6:38000511-38000512 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:37985000-38002400 | Weak transcription | Primary B cells from cord blood | blood |
| 2 | chr6:37985000-38030200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 3 | chr6:37985200-38001400 | Weak transcription | Small Intestine | intestine |
| 4 | chr6:37988000-38001400 | Weak transcription | Stomach Mucosa | stomach |
| 5 | chr6:37990600-38005800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 6 | chr6:37993000-38001800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 7 | chr6:37994400-38011400 | Weak transcription | Aorta | Aorta |
| 8 | chr6:37995200-38000800 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 9 | chr6:37995600-38001200 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 10 | chr6:37995800-38001200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 11 | chr6:37995800-38003800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 12 | chr6:37995800-38005400 | Weak transcription | Psoas Muscle | Psoas |
| 13 | chr6:37995800-38008000 | Weak transcription | Fetal Muscle Leg | muscle |
| 14 | chr6:37995800-38013000 | Weak transcription | Fetal Thymus | thymus |
| 15 | chr6:37995800-38020600 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 16 | chr6:37996000-38000800 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 17 | chr6:37996000-38001200 | Weak transcription | Brain Substantia Nigra | brain |
| 18 | chr6:37996000-38001200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 19 | chr6:37996000-38001200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 20 | chr6:37996000-38001400 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 21 | chr6:37996000-38002000 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 22 | chr6:37996000-38002600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 23 | chr6:37996000-38015400 | Weak transcription | HSMMtube | muscle |
| 24 | chr6:37996200-38005400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 25 | chr6:37996200-38008000 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 26 | chr6:37996200-38008600 | Weak transcription | HUVEC | blood vessel |
| 27 | chr6:37996400-38001400 | Weak transcription | Primary T cells from cord blood | blood |
| 28 | chr6:37996600-38001200 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 29 | chr6:37996600-38002000 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 30 | chr6:37996600-38002000 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 31 | chr6:37996600-38002400 | Weak transcription | NHDF-Ad | bronchial |
| 32 | chr6:37997000-38001800 | Weak transcription | Adipose Nuclei | Adipose |
| 33 | chr6:37997000-38002400 | Weak transcription | Primary hematopoietic stem cells | blood |
| 34 | chr6:37997200-38001200 | Weak transcription | Liver | Liver |
| 35 | chr6:37997200-38001800 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 36 | chr6:37997200-38002400 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 37 | chr6:37997200-38002800 | Weak transcription | Osteobl | bone |
| 38 | chr6:37997600-38002400 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 39 | chr6:37997600-38007000 | Weak transcription | A549 | lung |
| 40 | chr6:37997800-38002000 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 41 | chr6:37998400-38001000 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 42 | chr6:37998600-38029200 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 43 | chr6:37999200-38000600 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 44 | chr6:37999200-38001000 | Weak transcription | GM12878-XiMat | blood |
| 45 | chr6:37999200-38001600 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 46 | chr6:37999200-38001800 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 47 | chr6:37999400-38002800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 48 | chr6:37999400-38004800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 49 | chr6:37999400-38005000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 50 | chr6:37999600-38001400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
