Variant report

Variant rs3800364
Chromosome Location chr6:38121211-38121212
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:38081800-38121800 Weak transcription Psoas Muscle Psoas
2 chr6:38084000-38122200 Weak transcription Primary T helper naive cells from peripheral blood blood
3 chr6:38084600-38124200 Weak transcription Hela-S3 cervix
4 chr6:38091400-38141800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr6:38095200-38122600 Weak transcription A549 lung
6 chr6:38103000-38127200 Weak transcription Colon Smooth Muscle Colon
7 chr6:38109200-38123000 Weak transcription Ovary ovary
8 chr6:38109200-38129000 Weak transcription Rectal Smooth Muscle rectum
9 chr6:38110200-38122200 Weak transcription HUVEC blood vessel
10 chr6:38111200-38122400 Weak transcription Primary hematopoietic stem cells blood
11 chr6:38111800-38138200 Weak transcription Fetal Brain Female brain
12 chr6:38112400-38128400 Weak transcription Brain Germinal Matrix brain
13 chr6:38112400-38138200 Weak transcription Fetal Brain Male brain
14 chr6:38113000-38127800 Weak transcription H9 Cell Line embryonic stem cell
15 chr6:38113200-38134400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr6:38113200-38138000 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr6:38114400-38138200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr6:38114600-38121400 Weak transcription Brain Inferior Temporal Lobe brain
19 chr6:38114600-38122600 Weak transcription HMEC breast
20 chr6:38114600-38123000 Weak transcription Brain Substantia Nigra brain
21 chr6:38114600-38123000 Weak transcription NH-A brain
22 chr6:38114600-38127200 Weak transcription HSMM muscle
23 chr6:38115200-38123200 Weak transcription Muscle Satellite Cultured Cells --
24 chr6:38115200-38123200 Weak transcription Brain Angular Gyrus brain
25 chr6:38115200-38123200 Weak transcription Brain Hippocampus Middle brain
26 chr6:38115800-38121800 Strong transcription Monocytes-CD14+_RO01746 blood
27 chr6:38115800-38122800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
28 chr6:38116000-38123400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr6:38116400-38121400 Strong transcription Primary monocytes fromperipheralblood blood
30 chr6:38116400-38122400 Strong transcription Primary hematopoietic stem cells short term culture blood
31 chr6:38117200-38122000 Strong transcription Liver Liver
32 chr6:38117200-38131800 Weak transcription Stomach Mucosa stomach
33 chr6:38117600-38121600 Weak transcription iPS-20b Cell Line embryonic stem cell
34 chr6:38117600-38121800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr6:38117600-38122600 Weak transcription Right Atrium heart
36 chr6:38117600-38123600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr6:38117600-38137200 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr6:38117800-38122000 Strong transcription Duodenum Mucosa Duodenum
39 chr6:38118000-38123200 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
40 chr6:38118200-38121600 Strong transcription Colonic Mucosa Colon
41 chr6:38118200-38122600 Weak transcription NHDF-Ad bronchial
42 chr6:38118200-38122800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr6:38118400-38122400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr6:38118400-38122600 Strong transcription Spleen Spleen
45 chr6:38118600-38121800 Strong transcription Primary neutrophils fromperipheralblood blood
46 chr6:38118800-38121400 Strong transcription Primary T helper naive cells fromperipheralblood blood
47 chr6:38119000-38123200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr6:38119200-38122000 Strong transcription Esophagus oesophagus
49 chr6:38119200-38123200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr6:38119400-38121400 Strong transcription Right Ventricle heart

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