The 2.0 version of rSNPBase

Variant report

Variant rs73419960
Chromosome Location chr6:38047369-38047370
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:38017200-38055000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr6:38023000-38054800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr6:38023200-38052800 Weak transcription Gastric stomach
4 chr6:38026000-38047600 Weak transcription Hela-S3 cervix
5 chr6:38026200-38053800 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr6:38030800-38085800 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr6:38031400-38052400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr6:38031600-38048200 Weak transcription HUVEC blood vessel
9 chr6:38031600-38048600 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr6:38031600-38049400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr6:38031600-38053200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr6:38031600-38059600 Weak transcription Spleen Spleen
13 chr6:38031600-38061600 Weak transcription Brain Germinal Matrix brain
14 chr6:38032000-38052600 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr6:38032000-38052600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr6:38032200-38048200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr6:38032200-38048400 Weak transcription HSMM muscle
18 chr6:38032200-38048600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr6:38032200-38051400 Weak transcription Primary T helper cells fromperipheralblood blood
20 chr6:38032400-38050800 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr6:38032400-38056200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr6:38032800-38050000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr6:38032800-38050000 Weak transcription Primary T cells fromperipheralblood blood
24 chr6:38032800-38050000 Weak transcription Dnd41 blood
25 chr6:38032800-38050000 Weak transcription NHEK skin
26 chr6:38033000-38051200 Weak transcription Fetal Intestine Large intestine
27 chr6:38033000-38052600 Weak transcription Lung lung
28 chr6:38033000-38063400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr6:38033200-38048400 Weak transcription Primary neutrophils fromperipheralblood blood
30 chr6:38033200-38050000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
31 chr6:38033200-38051000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr6:38033400-38048200 Weak transcription NH-A brain
33 chr6:38033600-38050800 Weak transcription Placenta Placenta
34 chr6:38034200-38050200 Weak transcription HSMMtube muscle
35 chr6:38034200-38051200 Weak transcription Fetal Muscle Trunk muscle
36 chr6:38035000-38084000 Weak transcription Stomach Smooth Muscle stomach
37 chr6:38035200-38051000 Weak transcription Fetal Muscle Leg muscle
38 chr6:38035400-38050800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
39 chr6:38035800-38050400 Weak transcription GM12878-XiMat blood
40 chr6:38035800-38051000 Weak transcription Ovary ovary
41 chr6:38036200-38050200 Weak transcription Fetal Thymus thymus
42 chr6:38036400-38050000 Weak transcription Primary T helper cells PMA-I stimulated --
43 chr6:38036400-38075000 Weak transcription Thymus Thymus
44 chr6:38036600-38048400 Weak transcription Psoas Muscle Psoas
45 chr6:38036800-38050200 Weak transcription Left Ventricle heart
46 chr6:38037200-38052400 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr6:38041000-38050000 Weak transcription Fetal Adrenal Gland Adrenal Gland
48 chr6:38041400-38048400 Weak transcription Brain Hippocampus Middle brain
49 chr6:38042800-38048400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr6:38042800-38060000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015