The 2.0 version of rSNPBase

Variant report

Variant rs11753118
Chromosome Location chr6:37857869-37857870
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:37836400-37861800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr6:37840400-37860000 Weak transcription Primary T regulatory cells fromperipheralblood blood
3 chr6:37840600-37861800 Weak transcription Primary T cells from cord blood blood
4 chr6:37841600-37862400 Weak transcription Fetal Lung lung
5 chr6:37846000-37865200 Weak transcription Thymus Thymus
6 chr6:37846400-37859600 Weak transcription Primary T cells fromperipheralblood blood
7 chr6:37850200-37860600 Weak transcription GM12878-XiMat blood
8 chr6:37850200-37861600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr6:37850400-37861600 Weak transcription Fetal Stomach stomach
10 chr6:37850400-37861800 Weak transcription Primary hematopoietic stem cells blood
11 chr6:37850600-37865800 Weak transcription HSMMtube muscle
12 chr6:37850600-37869200 Weak transcription Lung lung
13 chr6:37850600-37890400 Weak transcription Primary B cells from cord blood blood
14 chr6:37850800-37865200 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr6:37851000-37861400 Weak transcription Fetal Intestine Small intestine
16 chr6:37851000-37861600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr6:37851000-37861800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr6:37851000-37861800 Weak transcription Placenta Placenta
19 chr6:37851000-37862200 Weak transcription Primary neutrophils fromperipheralblood blood
20 chr6:37851000-37866000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr6:37851000-37868800 Weak transcription Ovary ovary
22 chr6:37851000-37869200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr6:37851000-37884600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr6:37851200-37861400 Weak transcription Fetal Intestine Large intestine
25 chr6:37854800-37860200 Weak transcription Primary B cells from peripheral blood blood
26 chr6:37855600-37858800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr6:37855600-37865000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr6:37855800-37860800 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr6:37856000-37871000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr6:37856400-37858400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr6:37856600-37859000 Enhancers Brain Substantia Nigra brain
32 chr6:37856800-37858000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr6:37856800-37858200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr6:37856800-37858200 Enhancers Left Ventricle heart
35 chr6:37857000-37858000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
36 chr6:37857000-37858000 Enhancers Pancreatic Islets Pancreatic Islet
37 chr6:37857000-37858200 Enhancers Brain Anterior Caudate brain
38 chr6:37857000-37858200 Enhancers Brain Cingulate Gyrus brain
39 chr6:37857000-37861800 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr6:37857000-37865200 Weak transcription HepG2 liver
41 chr6:37857200-37858400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr6:37857200-37858800 Weak transcription A549 lung
43 chr6:37857200-37859600 Weak transcription Gastric stomach
44 chr6:37857200-37861800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
45 chr6:37857200-37861800 Weak transcription Fetal Muscle Leg muscle
46 chr6:37857200-37865000 Weak transcription Primary T killer naive cells fromperipheralblood blood
47 chr6:37857200-37865000 Weak transcription Rectal Smooth Muscle rectum
48 chr6:37857200-37871200 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr6:37857200-37871200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr6:37857200-37871400 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015