The 2.0 version of rSNPBase

Variant report

Variant rs11756030
Chromosome Location chr6:37940960-37940961
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:37922800-37957600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr6:37922800-37958600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr6:37923600-37942200 Weak transcription Aorta Aorta
4 chr6:37923600-37947400 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr6:37924600-37941600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr6:37926800-37955000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr6:37927000-37942400 Weak transcription Psoas Muscle Psoas
8 chr6:37927200-37942400 Weak transcription iPS-20b Cell Line embryonic stem cell
9 chr6:37929400-37942000 Weak transcription Esophagus oesophagus
10 chr6:37929400-37947800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr6:37929400-37953200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr6:37930200-37941600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr6:37930200-37942200 Weak transcription HepG2 liver
14 chr6:37930600-37941800 Weak transcription Monocytes-CD14+_RO01746 blood
15 chr6:37934400-37949800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr6:37934800-37947400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr6:37935000-37942400 Weak transcription HSMM muscle
18 chr6:37935000-37942400 Weak transcription NHDF-Ad bronchial
19 chr6:37935000-37947000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr6:37935200-37942400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr6:37935200-37942400 Weak transcription A549 lung
22 chr6:37935200-37947000 Weak transcription NHEK skin
23 chr6:37936400-37941600 Weak transcription Primary B cells from cord blood blood
24 chr6:37936600-37941200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr6:37936600-37947400 Weak transcription Left Ventricle heart
26 chr6:37938600-37941400 Enhancers Dnd41 blood
27 chr6:37938600-37941800 Enhancers Fetal Lung lung
28 chr6:37939000-37941600 Enhancers Primary hematopoietic stem cells blood
29 chr6:37939000-37941800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr6:37939200-37941200 Enhancers Primary hematopoietic stem cells short term culture blood
31 chr6:37939200-37941600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
32 chr6:37939200-37941800 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr6:37939400-37941000 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr6:37939400-37942600 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr6:37939400-37942600 Weak transcription Fetal Heart heart
36 chr6:37939400-37947400 Weak transcription Ovary ovary
37 chr6:37939600-37941000 Enhancers GM12878-XiMat blood
38 chr6:37939600-37942400 Weak transcription Duodenum Mucosa Duodenum
39 chr6:37939800-37942000 Weak transcription Fetal Muscle Leg muscle
40 chr6:37940000-37942400 Weak transcription Liver Liver
41 chr6:37940200-37942000 Weak transcription Primary T cells from cord blood blood
42 chr6:37940200-37942200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
43 chr6:37940200-37942200 Weak transcription Adipose Nuclei Adipose
44 chr6:37940200-37942200 Weak transcription Spleen Spleen
45 chr6:37940400-37941000 Weak transcription Colon Smooth Muscle Colon
46 chr6:37940400-37942000 Weak transcription Primary T helper cells fromperipheralblood blood
47 chr6:37940400-37942200 Weak transcription Primary T regulatory cells fromperipheralblood blood
48 chr6:37940400-37948600 Weak transcription HSMMtube muscle
49 chr6:37940600-37941000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr6:37940600-37941000 Enhancers Primary T killer memory cells from peripheral blood blood

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Last update: Aug 31, 2015