Variant report

Variant rs55990078
Chromosome Location chr6:38032626-38032627
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:38017200-38055000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr6:38020400-38046200 Weak transcription Stomach Mucosa stomach
3 chr6:38023000-38054800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr6:38023200-38052800 Weak transcription Gastric stomach
5 chr6:38024400-38033200 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr6:38024400-38040000 Weak transcription Fetal Heart heart
7 chr6:38024600-38033800 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr6:38024600-38035200 Weak transcription Brain Cingulate Gyrus brain
9 chr6:38024600-38041800 Weak transcription Fetal Brain Male brain
10 chr6:38024600-38045000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr6:38026000-38035200 Weak transcription Brain Substantia Nigra brain
12 chr6:38026000-38047600 Weak transcription Hela-S3 cervix
13 chr6:38026200-38053800 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr6:38028200-38034200 Weak transcription Placenta Amnion Placenta Amnion
15 chr6:38028400-38036800 Strong transcription Monocytes-CD14+_RO01746 blood
16 chr6:38029000-38033400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr6:38029000-38033600 Strong transcription Primary monocytes fromperipheralblood blood
18 chr6:38029200-38032800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr6:38029200-38033200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
20 chr6:38029200-38033200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr6:38029200-38033600 Strong transcription Placenta Placenta
22 chr6:38029200-38034000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr6:38029400-38032800 Strong transcription HUES6 Cell Line embryonic stem cell
24 chr6:38029400-38032800 Strong transcription Primary T cells fromperipheralblood blood
25 chr6:38029400-38032800 Strong transcription Primary hematopoietic stem cells short term culture blood
26 chr6:38029400-38032800 Strong transcription Muscle Satellite Cultured Cells --
27 chr6:38029400-38032800 Strong transcription Fetal Muscle Leg muscle
28 chr6:38029400-38032800 Strong transcription Dnd41 blood
29 chr6:38029400-38033000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr6:38029400-38033000 Strong transcription Fetal Intestine Large intestine
31 chr6:38029400-38033000 Strong transcription Lung lung
32 chr6:38029400-38033000 Strong transcription Sigmoid Colon Sigmoid Colon
33 chr6:38029400-38033200 Strong transcription Primary neutrophils fromperipheralblood blood
34 chr6:38029400-38033200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
35 chr6:38029400-38033200 Strong transcription Fetal Adrenal Gland Adrenal Gland
36 chr6:38029400-38033400 Strong transcription NH-A brain
37 chr6:38029400-38033800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr6:38029400-38034000 Strong transcription Breast Myoepithelial Primary Cells Breast
39 chr6:38029400-38034000 Strong transcription HepG2 liver
40 chr6:38029400-38034200 Strong transcription Fetal Muscle Trunk muscle
41 chr6:38029400-38034400 Strong transcription Primary T cells from cord blood blood
42 chr6:38029600-38032800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr6:38029600-38032800 Strong transcription Duodenum Mucosa Duodenum
44 chr6:38029600-38035200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr6:38030000-38034800 Weak transcription Ovary ovary
46 chr6:38030000-38035200 Weak transcription Small Intestine intestine
47 chr6:38030400-38032800 Strong transcription NHEK skin
48 chr6:38030400-38037800 Weak transcription Pancreas Pancrea
49 chr6:38030600-38033000 Weak transcription Colonic Mucosa Colon
50 chr6:38030600-38035600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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