Variant report

Variant rs55743233
Chromosome Location chr6:38030047-38030048
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:37985000-38030200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr6:38017200-38055000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr6:38017400-38031000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr6:38019000-38031800 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr6:38020400-38046200 Weak transcription Stomach Mucosa stomach
6 chr6:38023000-38054800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr6:38023200-38052800 Weak transcription Gastric stomach
8 chr6:38024400-38033200 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr6:38024400-38040000 Weak transcription Fetal Heart heart
10 chr6:38024600-38030800 Weak transcription Brain Angular Gyrus brain
11 chr6:38024600-38033800 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr6:38024600-38035200 Weak transcription Brain Cingulate Gyrus brain
13 chr6:38024600-38041800 Weak transcription Fetal Brain Male brain
14 chr6:38024600-38045000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr6:38025000-38030400 Weak transcription Colon Smooth Muscle Colon
16 chr6:38026000-38030600 Weak transcription GM12878-XiMat blood
17 chr6:38026000-38035200 Weak transcription Brain Substantia Nigra brain
18 chr6:38026000-38047600 Weak transcription Hela-S3 cervix
19 chr6:38026200-38053800 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr6:38026400-38030400 Weak transcription NHEK skin
21 chr6:38028200-38032200 Strong transcription Primary T helper cells fromperipheralblood blood
22 chr6:38028200-38034200 Weak transcription Placenta Amnion Placenta Amnion
23 chr6:38028400-38036800 Strong transcription Monocytes-CD14+_RO01746 blood
24 chr6:38028600-38032200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr6:38029000-38032200 Strong transcription Primary hematopoietic stem cells blood
26 chr6:38029000-38032400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
27 chr6:38029000-38033400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr6:38029000-38033600 Strong transcription Primary monocytes fromperipheralblood blood
29 chr6:38029200-38031200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr6:38029200-38031800 Strong transcription Osteobl bone
31 chr6:38029200-38032200 Strong transcription Primary T helper cells PMA-I stimulated --
32 chr6:38029200-38032400 Strong transcription Primary B cells from cord blood blood
33 chr6:38029200-38032400 Strong transcription Primary T regulatory cells fromperipheralblood blood
34 chr6:38029200-38032400 Strong transcription A549 lung
35 chr6:38029200-38032800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr6:38029200-38033200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
37 chr6:38029200-38033200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr6:38029200-38033600 Strong transcription Placenta Placenta
39 chr6:38029200-38034000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr6:38029400-38030200 Genic enhancers Fetal Lung lung
41 chr6:38029400-38030400 Strong transcription Pancreas Pancrea
42 chr6:38029400-38030800 Strong transcription Primary T helper naive cells fromperipheralblood blood
43 chr6:38029400-38030800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr6:38029400-38031400 Strong transcription iPS-18 Cell Line embryonic stem cell
45 chr6:38029400-38031400 Strong transcription Primary T helper naive cells from peripheral blood blood
46 chr6:38029400-38031400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr6:38029400-38031600 Strong transcription H1 Cell Line embryonic stem cell
48 chr6:38029400-38031600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr6:38029400-38031600 Strong transcription Esophagus oesophagus
50 chr6:38029400-38031600 Strong transcription Rectal Mucosa Donor 29 rectum

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