Variant report

Variant rs2395693
Chromosome Location chr6:38124219-38124220
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:38091400-38141800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
2 chr6:38103000-38127200 Weak transcription Colon Smooth Muscle Colon
3 chr6:38109200-38129000 Weak transcription Rectal Smooth Muscle rectum
4 chr6:38111800-38138200 Weak transcription Fetal Brain Female brain
5 chr6:38112400-38128400 Weak transcription Brain Germinal Matrix brain
6 chr6:38112400-38138200 Weak transcription Fetal Brain Male brain
7 chr6:38113000-38127800 Weak transcription H9 Cell Line embryonic stem cell
8 chr6:38113200-38134400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr6:38113200-38138000 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr6:38114400-38138200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr6:38114600-38127200 Weak transcription HSMM muscle
12 chr6:38117200-38131800 Weak transcription Stomach Mucosa stomach
13 chr6:38117600-38137200 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr6:38119400-38127800 Strong transcription Breast Myoepithelial Primary Cells Breast
15 chr6:38119800-38129400 Weak transcription Brain Cingulate Gyrus brain
16 chr6:38119800-38134800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr6:38120200-38125600 Weak transcription Primary T regulatory cells fromperipheralblood blood
18 chr6:38120400-38132800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr6:38120600-38125400 Weak transcription Primary T cells from cord blood blood
20 chr6:38120800-38125400 Enhancers Fetal Thymus thymus
21 chr6:38121000-38125800 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr6:38121000-38126200 Weak transcription GM12878-XiMat blood
23 chr6:38121000-38126400 Weak transcription NHEK skin
24 chr6:38121000-38159600 Weak transcription Primary T cells fromperipheralblood blood
25 chr6:38121200-38128400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr6:38121200-38136400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr6:38121400-38136600 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr6:38121400-38141000 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr6:38121600-38127600 Weak transcription Stomach Smooth Muscle stomach
30 chr6:38121600-38128400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr6:38121600-38131600 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr6:38121600-38132600 Weak transcription Osteobl bone
33 chr6:38121600-38137800 Weak transcription Colonic Mucosa Colon
34 chr6:38121800-38126600 Weak transcription Placenta Amnion Placenta Amnion
35 chr6:38121800-38132200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr6:38121800-38132600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr6:38121800-38132800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr6:38121800-38138000 Weak transcription Dnd41 blood
39 chr6:38121800-38153600 Weak transcription Primary B cells from peripheral blood blood
40 chr6:38122000-38127200 Weak transcription HSMMtube muscle
41 chr6:38122000-38129400 Weak transcription Liver Liver
42 chr6:38122000-38137600 Weak transcription Esophagus oesophagus
43 chr6:38122200-38134200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr6:38122600-38124400 Enhancers Fetal Lung lung
45 chr6:38122800-38124600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
46 chr6:38122800-38131400 Weak transcription Right Ventricle heart
47 chr6:38122800-38135800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
48 chr6:38123200-38124400 Enhancers Fetal Muscle Trunk muscle
49 chr6:38123200-38126600 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr6:38123200-38128600 Weak transcription Fetal Intestine Large intestine

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