Variant report

Variant	rs58289498
Chromosome Location	chr2:172048491-172048492
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:172048062..172050725-chr2:172343966..172345491,2	K562	blood:

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs1019710	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1019711	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11883894	0.97[ASN][1000 genomes]
rs12464487	0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12467411	0.81[EUR][1000 genomes]
rs12469418	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12469870	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12470359	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12473741	0.90[EUR][1000 genomes]
rs12477413	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12477548	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12477555	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12478336	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16859157	0.80[ASN][1000 genomes]
rs16859189	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16859203	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.83[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs16859206	0.99[ASN][1000 genomes]
rs1863679	0.94[ASN][1000 genomes]
rs1989612	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1989613	0.97[ASN][1000 genomes]
rs2356517	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35614064	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3770419	1.00[EUR][1000 genomes]
rs4305237	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4331471	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4365428	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs56216250	0.98[ASN][1000 genomes]
rs57335774	0.97[ASN][1000 genomes]
rs57851561	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs58126203	0.81[EUR][1000 genomes]
rs58441581	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs58712847	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59083018	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs60091560	0.97[ASN][1000 genomes]
rs60241632	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs60724749	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs60729063	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs60928633	1.00[EUR][1000 genomes]
rs728456	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs728457	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7423767	0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:172048200-172048800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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