The 2.0 version of rSNPBase

Variant report

Variant rs590252
Chromosome Location chr2:72607816-72607817
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:72592600-72613400 Weak transcription Gastric stomach
2 chr2:72594200-72608400 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr2:72595000-72613400 Weak transcription Aorta Aorta
4 chr2:72595000-72613600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr2:72595200-72608600 Weak transcription NHEK skin
6 chr2:72595200-72613400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr2:72595200-72613400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr2:72595200-72613400 Weak transcription Fetal Stomach stomach
9 chr2:72595200-72613400 Weak transcription Pancreas Pancrea
10 chr2:72595200-72613400 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr2:72595200-72613600 Weak transcription Right Ventricle heart
12 chr2:72595400-72613200 Weak transcription Left Ventricle heart
13 chr2:72595400-72613400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr2:72599600-72613400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr2:72600000-72613400 Weak transcription Ovary ovary
16 chr2:72601200-72613400 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr2:72602400-72608600 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr2:72603800-72613600 Weak transcription Duodenum Mucosa Duodenum
19 chr2:72604000-72608400 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr2:72604000-72613400 Weak transcription HSMMtube muscle
21 chr2:72604600-72608400 Weak transcription Fetal Muscle Leg muscle
22 chr2:72604600-72608600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr2:72605000-72608600 Weak transcription Rectal Smooth Muscle rectum
24 chr2:72605400-72608000 Weak transcription Primary hematopoietic stem cells blood
25 chr2:72605600-72608400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr2:72605600-72608600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr2:72605600-72608800 Weak transcription HepG2 liver
28 chr2:72605600-72613600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr2:72605800-72609600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr2:72605800-72613200 Weak transcription Brain Anterior Caudate brain
31 chr2:72606000-72613400 Weak transcription ES-WA7 Cell Line embryonic stem cell
32 chr2:72606200-72608600 Weak transcription Primary T helper naive cells fromperipheralblood blood
33 chr2:72606200-72609000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr2:72606200-72609000 Weak transcription Fetal Intestine Large intestine
35 chr2:72606200-72613400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr2:72606400-72608400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
37 chr2:72606400-72609600 Weak transcription Primary T helper cells PMA-I stimulated --
38 chr2:72606600-72608200 Weak transcription Stomach Smooth Muscle stomach
39 chr2:72606600-72613400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr2:72606800-72608400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr2:72606800-72608600 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr2:72606800-72611000 Weak transcription Primary T killer naive cells fromperipheralblood blood
43 chr2:72606800-72612400 Weak transcription Fetal Heart heart
44 chr2:72606800-72619400 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr2:72607000-72609000 Weak transcription Primary T cells fromperipheralblood blood
46 chr2:72607000-72609000 Weak transcription Placenta Placenta
47 chr2:72607000-72609600 Weak transcription Adipose Nuclei Adipose
48 chr2:72607000-72609800 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr2:72607000-72610200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr2:72607000-72613400 Weak transcription Esophagus oesophagus

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Last update: Aug 31, 2015