The 2.0 version of rSNPBase

Variant report

Variant rs59033182
Chromosome Location chr18:43809978-43809979
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:43777000-43812000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr18:43792200-43814600 Weak transcription Colon Smooth Muscle Colon
3 chr18:43794800-43815000 Weak transcription Rectal Smooth Muscle rectum
4 chr18:43796600-43814200 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr18:43796600-43815200 Weak transcription Pancreas Pancrea
6 chr18:43796600-43820000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr18:43796600-43827600 Weak transcription Fetal Muscle Leg muscle
8 chr18:43796800-43814800 Weak transcription Brain Inferior Temporal Lobe brain
9 chr18:43797000-43814800 Weak transcription Fetal Brain Female brain
10 chr18:43797000-43820000 Weak transcription Ovary ovary
11 chr18:43797000-43833400 Weak transcription Fetal Muscle Trunk muscle
12 chr18:43797400-43829600 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr18:43798800-43833800 Weak transcription HepG2 liver
14 chr18:43799000-43814600 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr18:43799000-43834000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr18:43800400-43810000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr18:43800400-43814400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr18:43800400-43814600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr18:43800800-43829000 Weak transcription HSMM muscle
20 chr18:43801200-43829600 Weak transcription Thymus Thymus
21 chr18:43802800-43828200 Weak transcription Primary B cells from peripheral blood blood
22 chr18:43802800-43830000 Weak transcription Brain Substantia Nigra brain
23 chr18:43803000-43820000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr18:43803600-43827800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr18:43803800-43820000 Weak transcription Monocytes-CD14+_RO01746 blood
26 chr18:43804000-43814600 Weak transcription Brain Anterior Caudate brain
27 chr18:43804200-43815200 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr18:43804400-43810000 Weak transcription Fetal Heart heart
29 chr18:43804400-43820000 Weak transcription Primary monocytes fromperipheralblood blood
30 chr18:43804400-43820000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr18:43804400-43825200 Weak transcription Hela-S3 cervix
32 chr18:43804600-43815200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr18:43804600-43825200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr18:43804800-43814400 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr18:43804800-43829400 Weak transcription Primary hematopoietic stem cells blood
36 chr18:43805200-43814600 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr18:43805200-43814800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr18:43805200-43815200 Weak transcription HMEC breast
39 chr18:43805200-43828200 Weak transcription GM12878-XiMat blood
40 chr18:43805400-43814600 Weak transcription Placenta Placenta
41 chr18:43805400-43814600 Weak transcription NHEK skin
42 chr18:43805400-43814800 Weak transcription Dnd41 blood
43 chr18:43805400-43827600 Weak transcription Fetal Thymus thymus
44 chr18:43805400-43829800 Weak transcription Fetal Intestine Large intestine
45 chr18:43805600-43814600 Weak transcription Gastric stomach
46 chr18:43805600-43820000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr18:43805600-43826200 Weak transcription Fetal Stomach stomach
48 chr18:43806200-43826200 Weak transcription Primary hematopoietic stem cells short term culture blood
49 chr18:43806400-43814400 Weak transcription Primary B cells from cord blood blood
50 chr18:43806400-43827600 Weak transcription Duodenum Mucosa Duodenum

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015