The 2.0 version of rSNPBase

Variant report

Variant rs73956268
Chromosome Location chr18:43805156-43805157
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:43777000-43812000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr18:43792200-43814600 Weak transcription Colon Smooth Muscle Colon
3 chr18:43794800-43815000 Weak transcription Rectal Smooth Muscle rectum
4 chr18:43796400-43806400 Weak transcription Small Intestine intestine
5 chr18:43796600-43809600 Weak transcription Aorta Aorta
6 chr18:43796600-43809600 Weak transcription Esophagus oesophagus
7 chr18:43796600-43809600 Weak transcription Lung lung
8 chr18:43796600-43809600 Weak transcription Spleen Spleen
9 chr18:43796600-43814200 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr18:43796600-43815200 Weak transcription Pancreas Pancrea
11 chr18:43796600-43820000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr18:43796600-43827600 Weak transcription Fetal Muscle Leg muscle
13 chr18:43796800-43814800 Weak transcription Brain Inferior Temporal Lobe brain
14 chr18:43797000-43806200 Weak transcription Liver Liver
15 chr18:43797000-43814800 Weak transcription Fetal Brain Female brain
16 chr18:43797000-43820000 Weak transcription Ovary ovary
17 chr18:43797000-43833400 Weak transcription Fetal Muscle Trunk muscle
18 chr18:43797400-43829600 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr18:43798800-43833800 Weak transcription HepG2 liver
20 chr18:43799000-43814600 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr18:43799000-43834000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr18:43799200-43806200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr18:43800200-43806200 Weak transcription NHLF lung
24 chr18:43800400-43810000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr18:43800400-43814400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr18:43800400-43814600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr18:43800600-43806400 Weak transcription HSMMtube muscle
28 chr18:43800800-43829000 Weak transcription HSMM muscle
29 chr18:43801000-43805200 Enhancers Primary T helper cells fromperipheralblood blood
30 chr18:43801000-43806000 Weak transcription NHDF-Ad bronchial
31 chr18:43801200-43807000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr18:43801200-43829600 Weak transcription Thymus Thymus
33 chr18:43801800-43805200 Enhancers Primary T helper naive cells from peripheral blood blood
34 chr18:43802200-43805200 Enhancers Primary T helper 17 cells PMA-I stimulated --
35 chr18:43802200-43806200 Weak transcription Adipose Nuclei Adipose
36 chr18:43802600-43805400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
37 chr18:43802800-43828200 Weak transcription Primary B cells from peripheral blood blood
38 chr18:43802800-43830000 Weak transcription Brain Substantia Nigra brain
39 chr18:43803000-43805200 Enhancers Primary T helper naive cells fromperipheralblood blood
40 chr18:43803000-43806000 Weak transcription Pancreatic Islets Pancreatic Islet
41 chr18:43803000-43807400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr18:43803000-43820000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr18:43803200-43806200 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr18:43803200-43806600 Enhancers Primary T helper cells PMA-I stimulated --
45 chr18:43803400-43805200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
46 chr18:43803400-43805200 Enhancers HMEC breast
47 chr18:43803600-43805200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr18:43803600-43805400 Enhancers Primary neutrophils fromperipheralblood blood
49 chr18:43803600-43809800 Weak transcription Right Atrium heart
50 chr18:43803600-43827800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015