The 2.0 version of rSNPBase

Variant report

Variant rs73956272
Chromosome Location chr18:43814997-43814998
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:43794800-43815000 Weak transcription Rectal Smooth Muscle rectum
2 chr18:43796600-43815200 Weak transcription Pancreas Pancrea
3 chr18:43796600-43820000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr18:43796600-43827600 Weak transcription Fetal Muscle Leg muscle
5 chr18:43797000-43820000 Weak transcription Ovary ovary
6 chr18:43797000-43833400 Weak transcription Fetal Muscle Trunk muscle
7 chr18:43797400-43829600 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr18:43798800-43833800 Weak transcription HepG2 liver
9 chr18:43799000-43834000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr18:43800800-43829000 Weak transcription HSMM muscle
11 chr18:43801200-43829600 Weak transcription Thymus Thymus
12 chr18:43802800-43828200 Weak transcription Primary B cells from peripheral blood blood
13 chr18:43802800-43830000 Weak transcription Brain Substantia Nigra brain
14 chr18:43803000-43820000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr18:43803600-43827800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr18:43803800-43820000 Weak transcription Monocytes-CD14+_RO01746 blood
17 chr18:43804200-43815200 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr18:43804400-43820000 Weak transcription Primary monocytes fromperipheralblood blood
19 chr18:43804400-43820000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr18:43804400-43825200 Weak transcription Hela-S3 cervix
21 chr18:43804600-43815200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr18:43804600-43825200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr18:43804800-43829400 Weak transcription Primary hematopoietic stem cells blood
24 chr18:43805200-43815200 Weak transcription HMEC breast
25 chr18:43805200-43828200 Weak transcription GM12878-XiMat blood
26 chr18:43805400-43827600 Weak transcription Fetal Thymus thymus
27 chr18:43805400-43829800 Weak transcription Fetal Intestine Large intestine
28 chr18:43805600-43820000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr18:43805600-43826200 Weak transcription Fetal Stomach stomach
30 chr18:43806200-43826200 Weak transcription Primary hematopoietic stem cells short term culture blood
31 chr18:43806400-43827600 Weak transcription Duodenum Mucosa Duodenum
32 chr18:43806400-43829000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
33 chr18:43806800-43818000 Weak transcription Osteobl bone
34 chr18:43807400-43818200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr18:43808200-43828800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr18:43809800-43815200 Weak transcription Primary T regulatory cells fromperipheralblood blood
37 chr18:43810000-43829000 Weak transcription Esophagus oesophagus
38 chr18:43810200-43821400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr18:43810200-43825200 Weak transcription Primary T cells fromperipheralblood blood
40 chr18:43810200-43828000 Weak transcription Lung lung
41 chr18:43810200-43829400 Weak transcription Fetal Intestine Small intestine
42 chr18:43810200-43832400 Weak transcription Aorta Aorta
43 chr18:43810400-43827800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
44 chr18:43812200-43816800 Enhancers Primary T helper cells PMA-I stimulated --
45 chr18:43813000-43815000 Weak transcription Primary T helper naive cells from peripheral blood blood
46 chr18:43813400-43815200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
47 chr18:43813600-43815200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
48 chr18:43814200-43815600 Enhancers Sigmoid Colon Sigmoid Colon
49 chr18:43814400-43815600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr18:43814400-43815800 Strong transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015