The 2.0 version of rSNPBase

Variant report

Variant rs59684117
Chromosome Location chr4:15401514-15401515
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:15384400-15402000 Weak transcription Fetal Lung lung
2 chr4:15388400-15401800 Weak transcription Fetal Stomach stomach
3 chr4:15394400-15401600 Weak transcription HSMMtube muscle
4 chr4:15394400-15402400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr4:15397000-15402200 Weak transcription Right Atrium heart
6 chr4:15398000-15402200 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr4:15398200-15401800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr4:15399000-15402200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr4:15399000-15402400 Enhancers Hela-S3 cervix
10 chr4:15399000-15405200 Enhancers Placenta Amnion Placenta Amnion
11 chr4:15399200-15402400 Enhancers NHEK skin
12 chr4:15399600-15402200 Enhancers Stomach Smooth Muscle stomach
13 chr4:15400000-15402400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr4:15400000-15402400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr4:15400000-15402800 Enhancers Colon Smooth Muscle Colon
16 chr4:15400000-15405400 Enhancers Primary monocytes fromperipheralblood blood
17 chr4:15400200-15402000 Enhancers Primary T helper naive cells fromperipheralblood blood
18 chr4:15400200-15402000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr4:15400200-15402000 Weak transcription NHDF-Ad bronchial
20 chr4:15400200-15402200 Enhancers Primary hematopoietic stem cells short term culture blood
21 chr4:15400200-15402800 Enhancers Primary T cells from cord blood blood
22 chr4:15400200-15403200 Enhancers Primary Natural Killer cells fromperipheralblood blood
23 chr4:15400200-15403200 Enhancers Ovary ovary
24 chr4:15400200-15403400 Enhancers Primary B cells from peripheral blood blood
25 chr4:15400200-15405000 Enhancers Primary hematopoietic stem cells blood
26 chr4:15400400-15401600 Weak transcription Osteobl bone
27 chr4:15400400-15401800 Weak transcription Muscle Satellite Cultured Cells --
28 chr4:15400400-15402200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr4:15400400-15402600 Enhancers Primary T helper cells PMA-I stimulated --
30 chr4:15400400-15403600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
31 chr4:15400600-15401600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr4:15400600-15402400 Weak transcription Lung lung
33 chr4:15400600-15403600 Enhancers Fetal Kidney kidney
34 chr4:15400800-15401800 Weak transcription Adipose Nuclei Adipose
35 chr4:15400800-15402000 Weak transcription Primary T cells fromperipheralblood blood
36 chr4:15400800-15402000 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr4:15400800-15402000 Weak transcription Aorta Aorta
38 chr4:15400800-15402200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr4:15400800-15402400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr4:15400800-15402400 Weak transcription Spleen Spleen
41 chr4:15401000-15402000 Weak transcription Primary T killer memory cells from peripheral blood blood
42 chr4:15401000-15402200 Enhancers Primary neutrophils fromperipheralblood blood
43 chr4:15401000-15402200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr4:15401000-15402200 Weak transcription Esophagus oesophagus
45 chr4:15401200-15401600 Weak transcription Primary T helper cells fromperipheralblood blood
46 chr4:15401200-15401600 Weak transcription HMEC breast
47 chr4:15401200-15402400 Enhancers Primary B cells from cord blood blood
48 chr4:15401200-15405400 Enhancers Rectal Smooth Muscle rectum
49 chr4:15401400-15401600 Enhancers Duodenum Smooth Muscle Duodenum
50 chr4:15401400-15401800 Weak transcription Primary T helper naive cells from peripheral blood blood

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Last update: Aug 31, 2015