Variant report
| Variant | rs59942820 |
|---|---|
| Chromosome Location | chr5:58221241-58221242 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:58216600-58222800 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 2 | chr5:58216600-58223200 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 3 | chr5:58216600-58224000 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 4 | chr5:58216800-58221400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 5 | chr5:58217000-58221400 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 6 | chr5:58217400-58221400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 7 | chr5:58217400-58221600 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 8 | chr5:58217400-58221800 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 9 | chr5:58218200-58222000 | Enhancers | A549 | lung |
| 10 | chr5:58218600-58224200 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 11 | chr5:58218800-58221600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 12 | chr5:58218800-58221800 | Weak transcription | Stomach Mucosa | stomach |
| 13 | chr5:58219000-58222000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 14 | chr5:58219000-58222600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 15 | chr5:58219000-58223600 | Enhancers | Cortex derived primary cultured neurospheres | brain |
| 16 | chr5:58219200-58221400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 17 | chr5:58219200-58222200 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 18 | chr5:58219200-58222400 | Weak transcription | Brain Hippocampus Middle | brain |
| 19 | chr5:58219200-58223000 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 20 | chr5:58219400-58221400 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 21 | chr5:58219400-58221800 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 22 | chr5:58219400-58221800 | Weak transcription | NH-A | brain |
| 23 | chr5:58219400-58222600 | Weak transcription | Brain Substantia Nigra | brain |
| 24 | chr5:58219600-58222600 | Enhancers | Aorta | Aorta |
| 25 | chr5:58219800-58221600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 26 | chr5:58219800-58221800 | Weak transcription | Fetal Muscle Leg | muscle |
| 27 | chr5:58219800-58222800 | Enhancers | HUES64 Cell Line | embryonic stem cell |
| 28 | chr5:58220200-58221400 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 29 | chr5:58220200-58223000 | Enhancers | HUES48 Cell Line | embryonic stem cell |
| 30 | chr5:58220400-58221400 | Weak transcription | Osteobl | bone |
| 31 | chr5:58220600-58222000 | Weak transcription | Right Atrium | heart |
| 32 | chr5:58221000-58222200 | Enhancers | Colon Smooth Muscle | Colon |
| 33 | chr5:58221000-58222200 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 34 | chr5:58221200-58221400 | Enhancers | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 35 | chr5:58221200-58221600 | Bivalent Enhancer | iPS-18 Cell Line | embryonic stem cell |
| 36 | chr5:58221200-58221600 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
| 37 | chr5:58221200-58221600 | Enhancers | iPS DF 6.9 Cell Line | embryonic stem cell |
| 38 | chr5:58221200-58222000 | Enhancers | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 39 | chr5:58221200-58222000 | Enhancers | Gastric | stomach |
| 40 | chr5:58221200-58222200 | Enhancers | Psoas Muscle | Psoas |
| 41 | chr5:58221200-58222600 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 42 | chr5:58221200-58222800 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 43 | chr5:58221200-58222800 | Enhancers | Pancreas | Pancrea |
| 44 | chr5:58221200-58223600 | Enhancers | Brain Anterior Caudate | brain |
