The 2.0 version of rSNPBase

Variant report

Variant rs60401042
Chromosome Location chr15:73843566-73843567
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:73808200-73847400 Weak transcription Left Ventricle heart
2 chr15:73820800-73847600 Weak transcription Aorta Aorta
3 chr15:73821200-73846000 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr15:73826800-73847600 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr15:73827800-73847600 Weak transcription Colon Smooth Muscle Colon
6 chr15:73832600-73847600 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr15:73832800-73846200 Weak transcription Duodenum Mucosa Duodenum
8 chr15:73833000-73847600 Weak transcription Liver Liver
9 chr15:73833000-73848000 Weak transcription HMEC breast
10 chr15:73833200-73847400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr15:73834600-73847000 Weak transcription Fetal Intestine Small intestine
12 chr15:73834600-73847400 Weak transcription Fetal Intestine Large intestine
13 chr15:73835000-73844000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr15:73835000-73848400 Weak transcription Brain Hippocampus Middle brain
15 chr15:73835400-73848800 Weak transcription Primary B cells from cord blood blood
16 chr15:73836200-73847600 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr15:73836200-73850600 Weak transcription HUVEC blood vessel
18 chr15:73836400-73847000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr15:73836600-73843800 Weak transcription NH-A brain
20 chr15:73836800-73847400 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr15:73836800-73847600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
22 chr15:73837000-73860000 Weak transcription Gastric stomach
23 chr15:73837200-73848400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr15:73838200-73848600 Weak transcription Primary T regulatory cells fromperipheralblood blood
25 chr15:73838200-73850400 Weak transcription Right Ventricle heart
26 chr15:73838200-73851000 Weak transcription Colonic Mucosa Colon
27 chr15:73838800-73847200 Weak transcription Primary T cells from cord blood blood
28 chr15:73840800-73846400 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr15:73842000-73847600 Weak transcription Esophagus oesophagus
30 chr15:73842200-73846800 Weak transcription Fetal Stomach stomach
31 chr15:73842400-73843600 Enhancers NHDF-Ad bronchial
32 chr15:73842400-73847400 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr15:73842600-73843800 Enhancers Primary monocytes fromperipheralblood blood
34 chr15:73842600-73843800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr15:73842600-73843800 Enhancers Monocytes-CD14+_RO01746 blood
36 chr15:73842600-73847400 Weak transcription Muscle Satellite Cultured Cells --
37 chr15:73842800-73843600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
38 chr15:73842800-73843600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr15:73842800-73847400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr15:73842800-73847600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr15:73842800-73847600 Weak transcription NHLF lung
42 chr15:73843000-73845600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr15:73843000-73846000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr15:73843000-73848400 Weak transcription Primary hematopoietic stem cells blood
45 chr15:73843000-73848400 Weak transcription Fetal Heart heart
46 chr15:73843200-73844800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr15:73843200-73846800 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr15:73843400-73843600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
49 chr15:73843400-73846600 Weak transcription ES-I3 Cell Line embryonic stem cell
50 chr15:73843400-73847400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015