Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1048683	0.80[AFR][1000 genomes]
rs10791780	0.90[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs10895901	0.83[AFR][1000 genomes]
rs10895902	0.81[AFR][1000 genomes]
rs10895904	0.81[ASN][1000 genomes]
rs11226911	0.83[AFR][1000 genomes]
rs11226920	0.88[AFR][1000 genomes]
rs11226922	0.85[ASN][1000 genomes]
rs11226931	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17105049	0.86[AFR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1939798	0.82[ASN][1000 genomes]
rs1939799	0.81[ASN][1000 genomes]
rs1940772	0.88[ASN][1000 genomes]
rs2277278	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3740869	0.86[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs4754141	0.81[ASN][1000 genomes]
rs7108636	0.88[AFR][1000 genomes]
rs72979073	0.83[EUR][1000 genomes]
rs7554	0.86[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs9651674	0.88[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1048381	chr11:105945117-106561574	Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:105991600-105992600	Enhancers	Placenta	Placenta
2	chr11:105992000-105992400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr11:105992000-105992400	Enhancers	A549	lung

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