The 2.0 version of rSNPBase

Variant report

Variant rs61796161
Chromosome Location chr4:30733146-30733147
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:30726200-30738600 Weak transcription Breast Myoepithelial Primary Cells Breast
2 chr4:30726200-30757400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr4:30726800-30740800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr4:30727400-30736400 Weak transcription Fetal Muscle Trunk muscle
5 chr4:30728200-30745600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr4:30728400-30733400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr4:30728400-30736000 Weak transcription Fetal Muscle Leg muscle
8 chr4:30728400-30746200 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr4:30728600-30743000 Weak transcription Rectal Smooth Muscle rectum
10 chr4:30729000-30748200 Weak transcription HUES64 Cell Line embryonic stem cell
11 chr4:30729200-30736400 Weak transcription Fetal Stomach stomach
12 chr4:30729200-30741600 Weak transcription Colon Smooth Muscle Colon
13 chr4:30729200-30746200 Weak transcription NH-A brain
14 chr4:30729400-30733200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr4:30729400-30736400 Weak transcription Fetal Lung lung
16 chr4:30729400-30736400 Weak transcription Stomach Smooth Muscle stomach
17 chr4:30729400-30740200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr4:30729400-30741600 Weak transcription Brain Anterior Caudate brain
19 chr4:30730200-30754800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr4:30730600-30734000 Weak transcription Fetal Heart heart
21 chr4:30730800-30733600 Weak transcription Hela-S3 cervix
22 chr4:30730800-30736200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr4:30732000-30737600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr4:30732200-30734200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr4:30732600-30734800 Weak transcription Esophagus oesophagus
26 chr4:30732600-30736200 Weak transcription Aorta Aorta
27 chr4:30732600-30746200 Weak transcription NHEK skin

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Last update: Aug 31, 2015