Variant report

Variant	rs35977739
Chromosome Location	chr4:30757888-30757889
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10003247	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10003467	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1021263	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1032174	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1047012	0.85[ASN][1000 genomes]
rs10517215	0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1374653	0.90[ASN][1000 genomes]
rs1447361	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1447363	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1447366	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1447374	0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs16867968	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16884045	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16884125	0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2121657	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2166716	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2166717	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2310224	0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs28587843	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34659374	0.86[ASN][1000 genomes]
rs35154721	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3756025	0.83[ASN][1000 genomes]
rs3775330	0.81[ASN][1000 genomes]
rs3775332	0.83[ASN][1000 genomes]
rs3775333	0.87[ASN][1000 genomes]
rs58200645	0.83[ASN][1000 genomes]
rs60684999	0.91[ASN][1000 genomes]
rs61796161	0.90[ASN][1000 genomes]
rs61796164	0.89[ASN][1000 genomes]
rs6448722	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6820105	0.80[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6820251	0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73117597	0.83[ASN][1000 genomes]
rs73119613	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73121566	0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73121588	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs977931	0.81[ASN][1000 genomes]

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:30737400-30770800	Weak transcription	Fetal Muscle Trunk	muscle
2	chr4:30739400-30765000	Weak transcription	Fetal Lung	lung
3	chr4:30746400-30761800	Weak transcription	Left Ventricle	heart
4	chr4:30746400-30767000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr4:30748800-30761000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr4:30752400-30758400	Weak transcription	Aorta	Aorta
7	chr4:30753600-30758400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr4:30754600-30759000	Enhancers	Colon Smooth Muscle	Colon
9	chr4:30754600-30759200	Enhancers	HUVEC	blood vessel
10	chr4:30754600-30760400	Enhancers	HMEC	breast
11	chr4:30754800-30760000	Enhancers	Muscle Satellite Cultured Cells	--
12	chr4:30755200-30758400	Weak transcription	NHLF	lung
13	chr4:30755400-30758200	Enhancers	NHEK	skin
14	chr4:30755800-30758400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr4:30756200-30758600	Weak transcription	Placenta Amnion	Placenta Amnion
16	chr4:30756600-30760400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr4:30756800-30758200	Weak transcription	Fetal Heart	heart
18	chr4:30756800-30758800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
19	chr4:30757200-30758400	Weak transcription	Stomach Smooth Muscle	stomach
20	chr4:30757200-30765400	Weak transcription	Fetal Stomach	stomach
21	chr4:30757400-30758400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
22	chr4:30757400-30758400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
23	chr4:30757400-30758400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
24	chr4:30757400-30758600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
25	chr4:30757400-30760200	Weak transcription	Spleen	Spleen
26	chr4:30757400-30761400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
27	chr4:30757400-30765200	Weak transcription	Rectal Smooth Muscle	rectum
28	chr4:30757600-30758000	Weak transcription	NH-A	brain
29	chr4:30757800-30758200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr4:30757800-30758800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
31	chr4:30757800-30760000	Enhancers	Hela-S3	cervix

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