Variant report

Variant	rs61796164
Chromosome Location	chr4:30737060-30737061
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10003247	0.81[ASN][1000 genomes]
rs10003467	0.89[ASN][1000 genomes]
rs1021263	0.93[ASN][1000 genomes]
rs1032174	0.93[ASN][1000 genomes]
rs1047012	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10517215	0.84[ASN][1000 genomes]
rs1374653	0.81[ASN][1000 genomes]
rs1447361	0.89[ASN][1000 genomes]
rs1447363	0.89[ASN][1000 genomes]
rs1447366	0.80[ASN][1000 genomes]
rs16867968	0.89[ASN][1000 genomes]
rs16884045	0.89[ASN][1000 genomes]
rs2121657	0.93[ASN][1000 genomes]
rs2166716	0.93[ASN][1000 genomes]
rs2166717	0.91[ASN][1000 genomes]
rs2310224	0.80[ASN][1000 genomes]
rs28587843	0.89[ASN][1000 genomes]
rs34659374	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35154721	0.81[ASN][1000 genomes]
rs35977739	0.89[ASN][1000 genomes]
rs3756025	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3775330	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3775332	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3775333	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs58200645	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs60684999	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs61796161	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6448722	0.89[ASN][1000 genomes]
rs6820251	0.80[ASN][1000 genomes]
rs71190457	0.81[ASN][1000 genomes]
rs73117597	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs73119613	0.90[ASN][1000 genomes]
rs73121566	0.84[ASN][1000 genomes]
rs73121588	0.84[ASN][1000 genomes]
rs977931	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:30726200-30738600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr4:30726200-30757400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr4:30726800-30740800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr4:30728200-30745600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr4:30728400-30746200	Weak transcription	Duodenum Smooth Muscle	Duodenum
6	chr4:30728600-30743000	Weak transcription	Rectal Smooth Muscle	rectum
7	chr4:30729000-30748200	Weak transcription	HUES64 Cell Line	embryonic stem cell
8	chr4:30729200-30741600	Weak transcription	Colon Smooth Muscle	Colon
9	chr4:30729200-30746200	Weak transcription	NH-A	brain
10	chr4:30729400-30740200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
11	chr4:30729400-30741600	Weak transcription	Brain Anterior Caudate	brain
12	chr4:30730200-30754800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr4:30732000-30737600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr4:30732600-30746200	Weak transcription	NHEK	skin
15	chr4:30733200-30738000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr4:30734600-30739000	Weak transcription	Fetal Heart	heart
17	chr4:30736000-30737600	Strong transcription	Fetal Muscle Leg	muscle
18	chr4:30736200-30737200	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr4:30736200-30737600	Strong transcription	Aorta	Aorta
20	chr4:30736400-30737400	Strong transcription	Fetal Muscle Trunk	muscle
21	chr4:30736400-30737400	Strong transcription	Fetal Stomach	stomach
22	chr4:30736400-30737400	Strong transcription	Stomach Smooth Muscle	stomach
23	chr4:30736400-30738200	Strong transcription	Fetal Lung	lung
24	chr4:30736600-30737800	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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