The 2.0 version of rSNPBase

Variant report

Variant rs61958025
Chromosome Location chr13:52982388-52982389
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:52980200-52985600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
2 chr13:52980200-52988400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr13:52980200-52989800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr13:52980200-53002000 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr13:52980200-53021600 Weak transcription Small Intestine intestine
6 chr13:52980600-52983400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr13:52980600-52983400 Weak transcription Lung lung
8 chr13:52980600-52983600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr13:52980600-52985000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr13:52980600-52985000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr13:52980600-52985600 Weak transcription Primary T helper cells fromperipheralblood blood
12 chr13:52980600-52985600 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr13:52980600-52985800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr13:52980600-52985800 Weak transcription Aorta Aorta
15 chr13:52980600-52985800 Weak transcription Brain Angular Gyrus brain
16 chr13:52980600-52985800 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr13:52980600-52986200 Weak transcription Spleen Spleen
18 chr13:52980600-52986400 Weak transcription Primary T regulatory cells fromperipheralblood blood
19 chr13:52980600-52986400 Weak transcription Brain Substantia Nigra brain
20 chr13:52980600-52986400 Weak transcription Ovary ovary
21 chr13:52980600-52986600 Weak transcription HepG2 liver
22 chr13:52980600-52987000 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr13:52980600-52988200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr13:52980600-52988200 Weak transcription Esophagus oesophagus
25 chr13:52980600-52988200 Weak transcription Fetal Stomach stomach
26 chr13:52980600-52988200 Weak transcription Gastric stomach
27 chr13:52980600-52988200 Weak transcription Pancreas Pancrea
28 chr13:52980600-52988400 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr13:52980600-52988600 Weak transcription Primary T helper naive cells from peripheral blood blood
30 chr13:52980600-52989800 Weak transcription Placenta Amnion Placenta Amnion
31 chr13:52980800-52983400 Weak transcription Primary hematopoietic stem cells blood
32 chr13:52980800-52983400 Weak transcription Fetal Intestine Small intestine
33 chr13:52980800-52983600 Weak transcription Fetal Muscle Leg muscle
34 chr13:52980800-52983800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr13:52980800-52983800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr13:52980800-52984600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr13:52980800-52984600 Weak transcription A549 lung
38 chr13:52980800-52984800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr13:52980800-52984800 Weak transcription HSMM muscle
40 chr13:52980800-52985000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr13:52980800-52985000 Weak transcription HMEC breast
42 chr13:52980800-52985000 Weak transcription NHLF lung
43 chr13:52980800-52985200 Weak transcription Primary B cells from cord blood blood
44 chr13:52980800-52985200 Weak transcription NHEK skin
45 chr13:52980800-52985400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr13:52980800-52985400 Weak transcription Cortex derived primary cultured neurospheres brain
47 chr13:52980800-52985400 Weak transcription Left Ventricle heart
48 chr13:52980800-52985600 Weak transcription Fetal Muscle Trunk muscle
49 chr13:52980800-52985600 Weak transcription NHDF-Ad bronchial
50 chr13:52980800-52985800 Weak transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015